DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8545 and nsun4

DIOPT Version :10

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_001008649.1 Gene:nsun4 / 494106 ZFINID:ZDB-GENE-041212-77 Length:327 Species:Danio rerio


Alignment Length:245 Identity:75/245 - (30%)
Similarity:127/245 - (51%) Gaps:30/245 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 LAGHYMIQGASSLLPVMALAPQENERILDMCSAPGGKGSHIASIMKNTGV--LFAND---SNRDR 472
            :.|:|::. |:|:|||:||..:..:.:||:|:|||||   ..::::...|  |:|||   |...|
Zfish    95 ILGYYLLD-AASVLPVLALDVRPGQTVLDLCAAPGGK---TLALLQAHSVNHLWANDLSVSRTGR 155

  Fly   473 IKAIVANF---HRLGIVNAVVSCEDGTKF-RNIMTGFDRVLLDAPCT---GTGVVSKDPSVKTTK 530
            ::.|:.::   ..|...|..::|.||.:. ......|||||:|.|||   .:.||.::...|.::
Zfish   156 LRKILQSYVPKECLDEENIHITCIDGRELGMREEKSFDRVLVDVPCTTDRHSAVVEENNIFKRSR 220

  Fly   531 SEVDVQRCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALKKRNVKLVPTGL 595
            :: :.|:...||.:||:..|..    :..||.|||||||:...:||.|:..|:.....:|   |:
Zfish   221 TK-ERQKLPLLQIQLLVAGIQA----ARQGGLIVYSTCSLSQLQNECVVQQAISVAQEEL---GI 277

  Fly   596 DFGVEGFTKFRQH-----RFHPSLNLTKRYYPH-THNMDGFYVAKLKKFS 639
            ...|:....|.|.     .|.|.|::.:...|| ..|....|:.||::.:
Zfish   278 TVQVQDLRWFTQRFSDTFHFAPQLSVGELVLPHLCANFGPIYMCKLQRMN 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 nop2p 363..637 CDD:188051 75/241 (31%)
PRK13808 <745..886 CDD:172341
nsun4NP_001008649.1 RsmB <102..265 CDD:439914 58/171 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.