DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8545 and nsun-5

DIOPT Version :10

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_001366974.1 Gene:nsun-5 / 175153 WormBaseID:WBGene00013151 Length:439 Species:Caenorhabditis elegans


Alignment Length:384 Identity:94/384 - (24%)
Similarity:158/384 - (41%) Gaps:86/384 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QRIKDVSLVLSD----FKRYRQADRSRGEYIDLLRRDLCLYYSYNEFLMEKLMDMLPLTELMEYL 352
            ||||:|...:.|    .|..::||..                      |:|:       ::..|.
 Worm   107 QRIKEVEHAMQDEGRGIKAMKEADDG----------------------MKKI-------QIPRYA 142

  Fly   353 EASEIARPLTIRTNTLKTRRRDLAGALINRG------------VNLDPLGKWTKVGLVVFNSQVP 405
            ..:.:.........||:|.:..:.|.|....            |.:||..:    .|::|...:.
 Worm   143 RINTLKWTADEAMKTLETEKWKILGTLKPENFAEMVTKMKDDEVYVDPHVE----NLIIFAPNIQ 203

  Fly   406 LGATPEYLAGHYMI-QGASSLLPVMALAPQENERILDMCSAPGGKGSHIASIMKNTGVLFANDSN 469
            .......:...|:| |..:|.||...|.|:...::.|.|:|||.|.||.|:||:|.|.::|.|..
 Worm   204 NFYEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMENQGKVWAMDRA 268

  Fly   470 RDRIKAIVANFHRLGIVNAVVSCEDGTKFRNIMTGFDRV---LLDAPCTGTGVVSKDPSVKTTKS 531
            .||:..:........:..|...|.|..|.......|.:|   ::|.||:|:|:|.:...:....:
 Worm   269 ADRVATMKQLLDASKVAIASSFCGDFLKTDVTDKKFSKVKFAIVDPPCSGSGIVKRMDEITGGNA 333

  Fly   532 EVD-VQRCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVID-----------YALK 584
            |.: :::..|||..:|..|:.....|.:     |||||||..||||.|:|           |.||
 Worm   334 EKERLEKLKNLQAMILKHALKLPGLKRA-----VYSTCSVHEEENEQVVDEVLLDTYVRQNYVLK 393

  Fly   585 KRNVKLVPTGLDFGVEGFTKFRQH--RFHPSLNLTKRYYPHTHNMDGFYVAKLKKFSNT 641
            |   .::|.....|::.: :..:|  |.:|.:.||          :||:||..::..::
 Worm   394 K---NVLPEWTYRGLKTY-EVGEHCLRANPKVTLT----------NGFFVAVFERVKSS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 nop2p 363..637 CDD:188051 82/303 (27%)
PRK13808 <745..886 CDD:172341
nsun-5NP_001366974.1 RsmB <143..436 CDD:439914 82/315 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.