DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8545 and nsun-4

DIOPT Version :10

Sequence 1:NP_610786.2 Gene:CG8545 / 36365 FlyBaseID:FBgn0033741 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_490958.1 Gene:nsun-4 / 171790 WormBaseID:WBGene00021476 Length:465 Species:Caenorhabditis elegans


Alignment Length:440 Identity:104/440 - (23%)
Similarity:169/440 - (38%) Gaps:126/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 IERANKKLKKREAEEAQLADDEMLETVDKQDVFQLPVEGEETEKD--------------LTLQEV 290
            ||...|.::::...|.|....|:.......:.       |::|.|              .:..|:
 Worm   108 IETKRKSVEEKANRETQKVKHEISNPSTSTNT-------EDSEPDEAIFRSAAGLGEFRASAGEL 165

  Fly   291 QQRIKDVSLVLSDFKRYRQADRSRGEYIDLLRRDLCLYYSYNEFLMEKLMDMLPLTELMEYLEAS 355
            ......:.|..|:..:..:.....||.:.:.:||...||                          
 Worm   166 SSGSLQMGLGQSNQNKNVEITGFEGEGVRIPKRDHFFYY-------------------------- 204

  Fly   356 EIARPLTIRTNTLKTRRRDLAGALINRGVNLD-PLGKWTKVGLVVFNSQVPLGATPEYLAGHYMI 419
              .:.|.:|:              .:|.|.|| |.....:||:            |.|    :::
 Worm   205 --PQALHVRS--------------FDRAVLLDFPAPMKDEVGV------------PSY----WLL 237

  Fly   420 QGASSLLPVMALAPQENERILDMCSAPGGKGSHIASIMKNTGVLFANDSNRDRI----KAIVANF 480
            .| .|||||:||..|:::.:||||:||||| |.:|::......:..||....|:    :|::...
 Worm   238 DG-GSLLPVLALGLQKDDSLLDMCAAPGGK-SLLAALSNLPSKIVCNDFKLARLGQLKRALMTYV 300

  Fly   481 HRLG--IVNAVVSCEDGT--KFRNIMTGFDRVLLDAPC-TGTGVVSKDP----SVKTTKSEVDVQ 536
            ....  |...|:..:|.:  |..:....:|:||:|.|| |....||.|.    |..:|:..:|:.
 Worm   301 PEDSETIDKFVLKRKDASDVKTWDEFEAYDKVLVDVPCSTDRLSVSTDDGNLFSTGSTQQRLDLP 365

  Fly   537 RCYNLQRKLLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALK-KRNVKLVPTGLDFG-- 598
               .||.|:|:.|:    .....||.:|||||::.|.:||.|::.|:. .||        |||  
 Worm   366 ---VLQTKILVNAL----RSVKVGGSVVYSTCTLSPSQNEAVVENAVAVVRN--------DFGIV 415

  Fly   599 ---------VEGFTKFRQHRFH--PSLNLTKRYYPHTHNMDGFYVAKLKK 637
                     |...|....:|||  |...|...:.|  .|....|:.||.:
 Worm   416 TVEESLHQLVSHMTSSGLYRFHDTPLGALVVPFLP--SNFGPMYICKLTR 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8545NP_610786.2 nop2p 363..637 CDD:188051 85/301 (28%)
PRK13808 <745..886 CDD:172341
nsun-4NP_490958.1 RsmB <238..394 CDD:439914 53/164 (32%)
Blue background indicates that the domain is not in the aligned region.

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