DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and zgc:152904

DIOPT Version :10

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001428928.1 Gene:zgc:152904 / 767777 ZFINID:ZDB-GENE-060929-856 Length:840 Species:Danio rerio


Alignment Length:257 Identity:64/257 - (24%)
Similarity:115/257 - (44%) Gaps:38/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 NSSTYKLQIKDIQETDAGTYTCQVVISTVHKVSAEVKLSVRRPPVISDNSTQSVVASEGSEVQME 156
            |.....|.:|:|::||.|.|.|: ..:......:::.|.|...|.|:  ..::|.|.|||...:.
Zfish   262 NGGKSTLTVKNIKQTDGGPYMCR-ASNKAGSSESQLFLKVFVQPHIT--QLRNVTAVEGSAAMIS 323

  Fly   157 CYASGYPTPTITWRRENNAILPTDS-----------ATYVGNTLRIKSVKKEDRGTYYCVADNGV 210
            |.|.|.|.|.|:|||.::....||.           ..:..:.|.|..|:..|.|.:.|.|.:.:
Zfish   324 CTAEGEPLPEISWRRASDGHSFTDGEKSKDGRVEVRGRHGKSMLTISGVQLSDWGRFDCEALSRI 388

  Fly   211 SKGDRRNINVEVEFAPVITVPRPRLGQALQYD-----MDLECHIEAYPPPAIVWTKDDIQLANNQ 270
            . |.::::.:::|:|     |:.:..|::.|.     :::.|.:::.|...::|.:        :
Zfish   389 G-GHQKSMFLDIEYA-----PKFQTNQSIFYSWEGNPVNISCEVKSNPAATMLWRR--------E 439

  Fly   271 HYSISHFATAD---EYTD--STLRVITVEKRQYGDYVCKATNRFGEAEARVNLFETIIPVCP 327
            .::||...|::   ..||  |.|.|..|..|.:|.|.|.|.|..|.......|.:..:|..|
Zfish   440 RFTISSQGTSNIRIHSTDGRSLLEVTPVSDRDFGRYNCTARNNIGARYQEFILAQADVPSSP 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 10/38 (26%)
Ig strand B 46..50 CDD:409381
Ig strand C 60..63 CDD:409381
Ig strand E 96..100 CDD:409381 1/3 (33%)
Ig strand F 110..115 CDD:409381 2/4 (50%)
Ig strand G 124..127 CDD:409381 0/2 (0%)
Ig_3 134..208 CDD:464046 25/84 (30%)
Ig 227..318 CDD:472250 22/100 (22%)
Ig strand C 256..260 CDD:409353 0/3 (0%)
Ig strand E 286..290 CDD:409353 2/3 (67%)
Ig strand F 300..305 CDD:409353 2/4 (50%)
zgc:152904NP_001428928.1 None
Blue background indicates that the domain is not in the aligned region.

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