DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and zgc:171490

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001107058.1 Gene:zgc:171490 / 558926 ZFINID:ZDB-GENE-080204-29 Length:336 Species:Danio rerio


Alignment Length:144 Identity:36/144 - (25%)
Similarity:56/144 - (38%) Gaps:24/144 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LVIKDSRFSLRYDPNSSTYKLQIKDIQET-DAGTYTCQVVISTVHKVSAEVKLSVRRP-PVISDN 140
            |..|:.||..|...:..|..|.|.:|:.. |.|.|  |::|   |..|:..|.::.:. .:.:|.
Zfish    82 LKAKNERFRNRLKLDEETGDLTILNIRTADDTGDY--QLII---HSNSSNNKDNIEKTF
RIAADT 141

  Fly   141 S-TQSVVASEGSEV----------QMECYASGYPTPTITWRRE---NNAILP---TDSATYVGNT 188
            | .:|....||..|          :|..|.|......:|..:.   .||...   ||......::
Zfish   142 SEMKSPSVKEGESVTLDPGVNAYNEMSWYFSDILIARLTGNQSQICTNAECKERFTDRLKTENDS 206

  Fly   189 LRIKSVKKEDRGTY 202
            |.|.:.:..|.|.|
Zfish   207 LNITNSRSTDSGEY 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 17/53 (32%)
FR1 37..50 CDD:409353
Ig strand A' 37..42 CDD:409353
Ig strand B 44..51 CDD:409353
CDR1 51..59 CDD:409353
Ig strand C 59..63 CDD:409353
FR2 60..63 CDD:409353
CDR2 67..81 CDD:409353 1/2 (50%)
Ig strand C' 68..72 CDD:409353
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 10/31 (32%)
Ig strand D 84..90 CDD:409353 3/5 (60%)
Ig strand E 94..102 CDD:409353 3/7 (43%)
Ig strand F 108..115 CDD:409353 2/6 (33%)
CDR3 116..124 CDD:409353 2/7 (29%)
FR4 124..130 CDD:409353 2/5 (40%)
Ig strand G 124..130 CDD:409353 2/5 (40%)
Ig_3 134..208 CDD:404760 19/87 (22%)
Ig strand B 153..157 CDD:409353 2/13 (15%)
Ig strand C 166..170 CDD:409353 1/3 (33%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 1/2 (50%)
Ig strand G 215..218 CDD:409353
Ig 227..318 CDD:416386
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
zgc:171490NP_001107058.1 Ig 36..135 CDD:299845 17/57 (30%)
Ig 145..240 CDD:299845 17/76 (22%)
IG_like 145..239 CDD:214653 17/76 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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