DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and DIP-gamma

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster


Alignment Length:329 Identity:92/329 - (27%)
Similarity:151/329 - (45%) Gaps:43/329 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 CSVQYAKEYNVLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQ 114
            |||:...:..|.:|:. ||...|:....:|..::|.|:.:. :..|:||:|..::|:|.|.|.||
  Fly    60 CSVRNLGKNKVGWLRA-SDQTVLALQGRVVTHNARISVMHQ-DMHTWKLKISKLRESDRGCYMCQ 122

  Fly   115 VVISTVHKVSAEVKLSVRRPPVISDNSTQSVVASEGSEVQMECYASGYPTPTITWRRENNAIL-- 177
            :..|.:.|....:.:.| .|.:|::.|:..:...||.:..:.|.|:|.|.|.:|||||:..::  
  Fly   123 INTSPMKKQVGCIDVQV
-PPDIINEESSADLAVQEGEDATLTCKATGNPQPRVTWRREDGEMILI 186

  Fly   178 --PTDS-----ATYVGNTLRIKSVKKEDRGTYYCVADNGVSKGDRRNINVEVEFAPVITVPRPRL 235
              |...     .:|.|::||:..:::...|.|.|:|.|.|.....:.:::.|:|||::..|...|
  Fly   187 RKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSV
QFAPMVRAPSQLL 251

  Fly   236 GQALQYDMDLECHIEAYPPPAIVWTK---------------------DDIQLANNQHYSISHFAT 279
            |..|..|:.|||.:||.|.|...|.|                     ....|.:...|.|:.  .
  Fly   252 GTPLGSDVQLECQVEASPSPVSYWLKGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITE--R 314

  Fly   280 ADEYTDSTLRVI-TVEKRQYGDYVCKATNRFGEAEARVNLFETIIPVCPPACGQ-----AYIAGA 338
            .|.|....|.|: :......|.|.|.:||..|.||..:.|:|  |.:.|.|...     .||.|.
  Fly   315 RDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGTLRLYE--IKLHPGASASNDDHLNYIGGL 377

  Fly   339 EDVS 342
            |:.:
  Fly   378 EEAA 381

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 23/80 (29%)
FR1 37..50 CDD:409353 92/329 (28%)
Ig strand A' 37..42 CDD:409353