DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and CG13506

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:303 Identity:59/303 - (19%)
Similarity:132/303 - (43%) Gaps:28/303 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DIGGTVEFDCSVQYAKE-----YNVLFLKTDSDP---VFLS-------TGSTLVIKDSRFSLRYD 90
            |...|...|.:..:|::     ::|..|:.::.|   |.|:       ..:.:|...:|..:...
  Fly    50 DDDDTQIIDVTKNHAEQEAPPYFDVTDLRVEAKPGDDVILNCDARNFQLSNAVVWYKNRIIIANG 114

  Fly    91 PNSSTYKLQ--------IKDIQETDAGTYTCQVVISTVHKVSAEVKLSVRRPPVISDN--STQSV 145
            .|..:.::|        ::::...|:..|.|:::...|.:.:| :::..|...:..|.  :.:|.
  Fly   115 QNPISQRVQCMLNNSILLRNVSPEDSDDYYCEILPQRVRQHTA-LRVGARLSILCDDRDITDRSQ 178

  Fly   146 VASEGSEVQMECYASGYPTPTITWRRENNAILPTDSATYVGNTLRIKSVKKEDRGTYYCVADNGV 210
            ...:|...::||........||.|...:....|: |.......:.:.:|.:::.|.|.|:||:|.
  Fly   179 TFRQGDHHKLECRTYLPDNATIKWSFNDLNGQPS-SVDNQNGVIILDNVDEKNAGDYQCLADDGS 242

  Fly   211 SKGDRRNINVEVEFAPVITVPRPRLGQALQYDMDLECHIEAYPPPAIVWTKDDIQLANNQHYSIS 275
            .......::::|:::|:::..|..:........:|.|:..|.|.....:.||...|..:..||:.
  Fly   243 RHPPHGTVHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKDGKTLQLSDKYSLK 307

  Fly   276 HFATADEYTDSTLRVITVEKRQYGDYVCKATNRFGEAEARVNL 318
            . :..:::..:||.|..|.....|:|:|:..|..|..|.:|::
  Fly   308 D-SVHNDHNRTTLIVREVTDSDLGEYLCQVENAIGSNEVKVHV 349

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 18/112 (16%)
FR1 37..50 CDD:409353 2/8 (25%)