DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and Opcml

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_006510497.1 Gene:Opcml / 330908 MGIID:97397 Length:354 Species:Mus musculus


Alignment Length:300 Identity:90/300 - (30%)
Similarity:138/300 - (46%) Gaps:31/300 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FLSTGSTLVIKDSRFSLRYDP------NSST-YKLQIKDIQETDAGTYTCQVVISTVHKVSAEVK 128
            :|:..:.|...:.::|:  ||      |:.| |.:.|:::...|.|.|||.|.... |..::.|.
Mouse    68 WLNRSTILYAGNDKWSI--DPRVIILVNTPTQYSIMIQNVDVYDEGPYTCSVQTDN-HPKTSRVH 129

  Fly   129 LSVRRPPVISDNSTQSVVASEGSEVQMECYASGYPTPTITWR----RENNAILPTDSATYVGNTL 189
            |.|:.||.|. |.:..:..:|||.|.:.|.|.|.|.||:|||    :|....:..|      ..|
Mouse   130 LIV
QVPPQIM-NISSDITVNEGSSVTLLCLAIGRPEPTVTWRHLSVKEGQGFVSED------EYL 187

  Fly   190 RIKSVKKEDRGTYYCVADNGVSKGDRRNINVEVEFAPVITVPRPRLGQALQYDMDLECHIEAYPP 254
            .|..:|::..|.|.|.|.|.|:..|.|.:.:.|.:.|.|:..: ..|.::.....|.|...|.|.
Mouse   188 EISDIKRDQSGEYECSALN
DVAAPDVRKVKITVNYPPYISKAK-NTGVSVGQKGILSCEASAVPM 251

  Fly   255 PAIVWTKDDIQLANNQHYSISHFATADEYTDSTLRVITVEKRQYGDYVCKATNRFGEAEARVNLF 319
            ....|.|:|.:||.    .:......::...|||....|.::.||:|.|.|||:.|...|.:.|:
Mouse   252 AEFQWFKEDTRLAT----GLDGVRIENKGRISTLTFFNVSEKDYGNYTCVATNKLGNTNASITLY 312

  Fly   320 ETIIPVCPPACGQAYIAGAEDVSATSFALVGI-LAALLFA 358
            | |.|....|...|.|.|   |::.|.||..: |:...||
Mouse   313 E-ISPSSAVAGPGAVIDG---VNSASRALACLWLSGTFFA 348

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 18/66 (27%)
FR1 37..50 CDD:409353
Ig strand A' 37..42 CDD:409353
Ig strand B 44..51 CDD:409353
CDR1 51..59 CDD:409353
Ig strand C 59..63 CDD:409353
FR2 60..63 CDD:409353
CDR2 67..81 CDD:409353 2/9 (22%)