DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and Sdk1

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_808547.3 Gene:Sdk1 / 330222 MGIID:2444413 Length:2193 Species:Mus musculus


Alignment Length:349 Identity:87/349 - (24%)
Similarity:139/349 - (39%) Gaps:77/349 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WSTLLLAIFVQQTLAQRTPTISYITQEQIKDI---GGTVEFDCSVQYAKEYNVLFLKTDSDPVFL 72
            |:.|||.:.:.:.|||......:.|:..:..|   |..:...|..:.:......:::.||:   |
Mouse    66 WALLLLQLHLLRALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSE---L 127

  Fly    73 STGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQV--VISTVHKVSAEVKLSVRRPP 135
            :|                 .||.||..|..:|:.|||.|.|.|  .:..:.:..:|::::.....
Mouse   128 TT-----------------YSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNF 175

  Fly   136 VISDNSTQSVVASEGSEVQM------ECYASGYPTPTITWRRENNAILPTDS-ATYVGNTLRIKS 193
            :.:|   |....|:|....:      .|     |.|.:||.||.:.|:|:.. |..:.|.|.|.:
Mouse   176 MDTD---QRKTVSQGHAALLNLLPIVSC-----PQPQVTWFREGHKIIPSSRIAITLENQLVILA 232

  Fly   194 VKKEDRGTYYCVA---DNGVSKGD-------RRNINVEVEFAPVITV-PRPRLGQALQYDMDLEC 247
            ....|.|.||..|   .||.:|..       .|:.......||:|.| |..|...|...:..|||
Mouse   233 TTASDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLEC 297

  Fly   248 HIEAYPPP--AIVWTKDDIQLANNQH-----YSISHFATADEYTDSTLRVITVEKRQYGDYVCKA 305
            ...|.|..  ::.|.::.::|.:..|     .:|::..:||.                |.|||:|
Mouse   298 IANARPVEELSVHWKRNGVRLTSGLHSYGRRLTITNPTSADT----------------GMYVCEA 346

  Fly   306 TNRFGEAE-ARVNLFETIIPVCPP 328
            |.|....| ||...|.:||.  ||
Mouse   347 TLRGSTFEPARARAFLSIIE--PP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 20/99 (20%)
FR1 37..50 CDD:409353 2/15 (13%)
Ig strand A' 37..42 CDD:409353 0/4 (0%)
Ig strand B 44..51 CDD:409353 0/6 (0%)
CDR1 51..59 CDD:409353 0/7 (0%)
Ig strand C 59..63 CDD:409353 0/3 (0%)
FR2 60..63 CDD:409353 0/2 (0%)
CDR2 67..81 CDD:409353 3/13 (23%)
Ig strand C' 68..72 CDD:409353 0/3 (0%)
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 11/30 (37%)
Ig strand D 84..90 CDD:409353 0/5 (0%)
Ig strand E 94..102 CDD:409353 4/7 (57%)
Ig strand F 108..115 CDD:409353 4/6 (67%)
CDR3 116..124 CDD:409353 0/7 (0%)
FR4 124..130 CDD:409353 1/5 (20%)
Ig strand G 124..130 CDD:409353 1/5 (20%)
Ig_3 134..208 CDD:404760 22/83 (27%)
Ig strand B 153..157 CDD:409353 0/9 (0%)
Ig strand C 166..170 CDD:409353 1/3 (33%)
Ig strand E 187..191 CDD:409353 2/3 (67%)
Ig strand F 201..206 CDD:409353 2/4 (50%)
Ig strand G 215..218 CDD:409353 1/2 (50%)
Ig 227..318 CDD:416386 26/99 (26%)
Ig strand C 256..260 CDD:409353 0/3 (0%)
Ig strand E 286..290 CDD:409353 0/3 (0%)
Ig strand F 300..305 CDD:409353 3/4 (75%)
Sdk1NP_808547.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Ig_2 94..169 CDD:290606 20/94 (21%)
IG_like 100..169 CDD:214653 19/88 (22%)
IG_like 183..263 CDD:214653 23/84 (27%)
Ig 197..247 CDD:299845 18/54 (33%)
IG_like 281..357 CDD:214653 22/91 (24%)
IGc2 294..347 CDD:197706 15/68 (22%)
I-set 368..457 CDD:254352 1/1 (100%)
Ig 388..454 CDD:143165
I-set 462..552 CDD:254352
Ig 476..552 CDD:299845
I-set 557..646 CDD:254352
Ig 562..646 CDD:299845
FN3 650..741 CDD:238020
fn3 753..839 CDD:278470
FN3 854..949 CDD:238020
FN3 954..1036 CDD:238020
FN3 1052..1148 CDD:238020
FN3 1158..1253 CDD:238020
FN3 1261..1349 CDD:238020
FN3 1360..1453 CDD:238020
FN3 1459..1554 CDD:238020
FN3 1562..1676 CDD:238020
FN3 1686..1779 CDD:238020
FN3 1784..1865 CDD:238020
FN3 1885..1978 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2057..2080
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2187..2193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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