DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and dpr18

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_573102.1 Gene:dpr18 / 32572 FlyBaseID:FBgn0030723 Length:519 Species:Drosophila melanogaster


Alignment Length:324 Identity:78/324 - (24%)
Similarity:127/324 - (39%) Gaps:76/324 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DCSVQYAKEYNVLFLKTDSDPV-FLSTGSTLVIKDSRFSLRYD-PNSSTYKLQIKDIQETDAGTY 111
            :|.|...|:..|::::..::.| .|:.|:.....|.|..:::. ||:  ::|.|...|..|||.|
  Fly   245 NCRVGMLKDKTVMWVRRTAEKVSLLTVGNVTYSGDPRIRVKFQYPNN--WRLLINPTQTEDAGVY 307

  Fly   112 TCQVVISTVHKVSAEVKLSVRRPPV-ISDNSTQSV---VASEGSEVQMECYASGYPTPTITWRRE 172
            .|||  ||.........|:|..||: |.|...:.|   ....||.|.::|..|     ...:::|
  Fly   308 MCQV--STHPPRVFTTNLTVL
EPPLRIIDEHERDVGDRYYKSGSTVDLQCQIS-----RSFFQKE 365

  Fly   173 NNAIL-PTDSATYVGNTLRIKSVKKEDRGTYYCVADNGVSKGDRRNIN-VEVEFAPVITVPRPRL 235
            ...|| .||||...     ::.:..|.......:.          |:| .:.:|:          
  Fly   366 RQTILKSTDSANDA-----VQKLINETTSELNLIG----------NVNQTQHKFS---------- 405

  Fly   236 GQALQYDMDLECHIEAYPPPAIVWTKDD--IQLANNQHYSISHFATADEYTDSTLRVITVEKRQY 298
            ||      |||.:...:    |.|.||:  :|...|:..|:|     |.:..|.:.:...:....
  Fly   406 GQ------DLEKYFTKF----ITWAKDEEPLQGMTNRRLSVS-----DVWLTSRISIGDAKLSDS 455

  Fly   299 GDYVCKATNRFGEAEARVNLFETIIPVCP-----PACGQAYIAGAEDVSATSFALVGILAALLF 357
            |:|.|...          .||..|:.|..     ||..|..|....::  .|.|::|.|..|:|
  Fly   456 GNYSCSLG----------RLFTVIVQVQVLTGELPAAVQHNIGSRTEI--YSLAMLGHLLVLIF 507

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 24/83 (29%)