DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and PRTG

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_776175.2 Gene:PRTG / 283659 HGNCID:26373 Length:1150 Species:Homo sapiens


Alignment Length:357 Identity:82/357 - (22%)
Similarity:131/357 - (36%) Gaps:89/357 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ISYITQEQIKDI------GGTVEFDCSVQ------YAKEYNVLFLKTDSDPV-FLSTGSTLVIKD 82
            :|.|:..:::.|      ||...|.|.:.      ...|:|...|....|.: .|.||       
Human   131 LSTISAFEVQPISTEVHEGGVARFACKISSHPPAVITWEFNRTTLPMTMDRITALPTG------- 188

  Fly    83 SRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQVVISTVHK----------VSAEVKLSVRRPPVI 137
                          .|||.|:.:.|:|.|.| :..:..|:          :.|:...|...|.:|
Human   189 --------------VLQIYDVSQRDSGNYRC-IAATVAHRRKSMEASLTVIPAKESKSFHTPTII 238

  Fly   138 SDNSTQSVVASEGSEVQMECYASGYPTPTITWRRENNAILPTDSATYVGN-TLRIKSVKKEDRGT 201
            :  ..|::..|....|.:||.|:|.|.|.|:|.|.::..:...:...:|| .|.|..|:.:..|.
Human   239 A--GPQNITTSLHQTVVLECMATGNPKPIISWSRLDHKSIDVFNTRVLGNGNLMISDVRLQHAGV 301

  Fly   202 YYCVADNGVSKGDRRNINVEVEFAPVITVP----------RPRLGQALQYDMDLECHIEAYPPPA 256
            |.|.|    :....||..|.:....|:..|          |||.|.|     ...|..|..|.|.
Human   302 YVCRA----TTPGTRNFTVAMATLTVLAPPSFVEWPESLTRPRAGTA-----RFVCQAEGIPSPK 357

  Fly   257 IVWTKDDIQLANNQHYSISHFATADEYTDSTLRVITVEKRQYGDYVCKATNRFGEAEARVNLFET 321
            :.|.|:..::.:|....:         .:|.|.:..:.......|.|.|.|..|...:|..|  |
Human   358 MSWLKNGRKIHSNGRIKM---------YNSKLVINQIIPEDDAIYQCMAENSQGSILSRARL--T 411

  Fly   322 II-----PVCPPACGQAYIAGAEDVSATSFAL 348
            ::     |..|      |...||.:|:::..|
Human   412 VVMSEDRPSAP------YNVHAETMSSSAILL 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 22/117 (19%)
FR1 37..50 CDD:409353 4/18 (22%)
Ig strand A' 37..42 CDD:409353 0/4 (0%)
Ig strand B 44..51 CDD:409353 2/6 (33%)
CDR1 51..59 CDD:409353 1/13 (8%)
Ig strand C 59..63 CDD:409353 1/3 (33%)
FR2 60..63 CDD:409353 0/2 (0%)
CDR2 67..81 CDD:409353 4/14 (29%)
Ig strand C' 68..72 CDD:409353 1/4 (25%)
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 8/30 (27%)
Ig strand D 84..90 CDD:409353 0/5 (0%)
Ig strand E 94..102 CDD:409353 3/7 (43%)
Ig strand F 108..115 CDD:409353 3/6 (50%)
CDR3 116..124 CDD:409353 1/17 (6%)
FR4 124..130 CDD:409353 1/5 (20%)
Ig strand G 124..130 CDD:409353 1/5 (20%)
Ig_3 134..208 CDD:404760 23/74 (31%)
Ig strand B 153..157 CDD:409353 1/3 (33%)
Ig strand C 166..170 CDD:409353 1/3 (33%)
Ig strand E 187..191 CDD:409353 2/4 (50%)
Ig strand F 201..206 CDD:409353 2/4 (50%)
Ig strand G 215..218 CDD:409353 1/2 (50%)
Ig 227..318 CDD:416386 22/100 (22%)
Ig strand C 256..260 CDD:409353 0/3 (0%)
Ig strand E 286..290 CDD:409353 2/3 (67%)
Ig strand F 300..305 CDD:409353 2/4 (50%)
PRTGNP_776175.2 Ig 40..130 CDD:299845
Ig 139..223 CDD:299845 21/105 (20%)
IG_like 141..223 CDD:214653 21/103 (20%)
IG_like 241..323 CDD:214653 24/85 (28%)
IGc2 250..309 CDD:197706 19/62 (31%)
I-set 327..412 CDD:254352 22/100 (22%)
Ig 345..412 CDD:299845 16/77 (21%)
FN3 419..512 CDD:238020 7/25 (28%)
FN3 517..610 CDD:238020
fn3 624..699 CDD:278470
FN3 726..814 CDD:238020
FN3 821..911 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 981..1002
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1086..1150
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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