DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and HTRA4

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_710159.1 Gene:HTRA4 / 203100 HGNCID:26909 Length:476 Species:Homo sapiens


Alignment Length:174 Identity:34/174 - (19%)
Similarity:62/174 - (35%) Gaps:47/174 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QRTPTISYITQEQI--KDIG------GTVEFDCSVQYAKEYNVLFLKTDSDPVFLST-----GST 77
            |.|.|...::.:|.  |::|      ..|:.|.::.|......| :..|.|.:.:::     |.:
Human   287 QNTATAGIVSTKQRGGKELGMKDSDMDYVQIDATINYGNSGGPL-VNLDGDVIGVNSLRVTDGIS 350

  Fly    78 LVIKDSR---FSLRYD------------------------PNSSTYKLQIKDIQETDAGTYTCQV 115
            ..|...|   |...|.                        |.|...|:...|..:..:|.|.|:|
Human   351 FAIPSDRVRQFLAEYHEHQMKGKAFSNKKYLGLQMLSLTVPLSEELKMHYPDFPDVSSGVYVCKV 415

  Fly   116 VISTVHKVSA----EVKLSVRRPPVISDNSTQSVVASEGSEVQM 155
            |..|..:.|.    :|.:::...|:.:  :|..|.|.:...:.|
Human   416 VEGTAAQSSGLRDHDVIVNINGKPITT--TTDVVKALDSDSLSM 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 26/138 (19%)
FR1 37..50 CDD:409353 4/20 (20%)
Ig strand A' 37..42 CDD:409353 2/6 (33%)
Ig strand B 44..51 CDD:409353 2/6 (33%)
CDR1 51..59 CDD:409353 1/7 (14%)
Ig strand C 59..63 CDD:409353 1/3 (33%)
FR2 60..63 CDD:409353 1/2 (50%)
CDR2 67..81 CDD:409353 2/18 (11%)
Ig strand C' 68..72 CDD:409353 1/3 (33%)
Ig strand C' 79..81 CDD:409353 0/1 (0%)
FR3 84..115 CDD:409353 10/57 (18%)
Ig strand D 84..90 CDD:409353 2/8 (25%)
Ig strand E 94..102 CDD:409353 1/7 (14%)
Ig strand F 108..115 CDD:409353 3/6 (50%)
CDR3 116..124 CDD:409353 2/7 (29%)
FR4 124..130 CDD:409353 2/9 (22%)
Ig strand G 124..130 CDD:409353 2/9 (22%)
Ig_3 134..208 CDD:404760 5/22 (23%)
Ig strand B 153..157 CDD:409353 1/3 (33%)
Ig strand C 166..170 CDD:409353
Ig strand E 187..191 CDD:409353
Ig strand F 201..206 CDD:409353
Ig strand G 215..218 CDD:409353
Ig 227..318 CDD:416386
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
HTRA4NP_710159.1 IGFBP 40..94 CDD:278641
Kazal_2 108..152 CDD:284958
DegQ 156..470 CDD:223343 34/174 (20%)
Serine protease 202..362 15/75 (20%)
Trypsin_2 202..340 CDD:290102 12/53 (23%)
PDZ_serine_protease 380..470 CDD:238487 17/80 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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