DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lac and adgrl1.1

DIOPT Version :9

Sequence 1:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_002660669.2 Gene:adgrl1.1 / 100334775 ZFINID:ZDB-GENE-130116-2 Length:390 Species:Danio rerio


Alignment Length:279 Identity:49/279 - (17%)
Similarity:92/279 - (32%) Gaps:117/279 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WRPSISNCVWSTLLL--------------AIFVQQTLAQRTPTI-SYITQEQIKD---------- 41
            |...|.|.|.:|..|              |:|..:   :||..| .|..:.:||.          
Zfish   123 WDDYIQNRVTTTYKLPSRVDGTGFVVYDGAVFYNK---ERTRNIVKYDLRTRIKSGEAVIVNANY 184

  Fly    42 -------IGGTVEFDCSVQYAKEYNVLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQ 99
                   .||..:.|.:|.   |:.:..:.|..    .:.|..:|.:.:.::||::   .|::..
Zfish   185 HDASPYHRGGKSDIDLAVD---EHGLWVIYTTE----ANNGRLVVSQVNPYTLRFE---GTWQTS 239

  Fly   100 IKDIQETDAGTYTCQVVISTVHKVSAEVKLSVRRPPVISDNSTQSVVASEGSEVQMECYAS---- 160
            .:....:||             .|:..:..:||  .|..|:.:::     |.::.:..|.:    
Zfish   240 FEKRMASDA-------------FVACGILYAVR--SVYQDDDSEA-----GGDLILYAYDTRRNR 284

  Fly   161 ------GYPTP-----TITWRRENNAILPTDSATYVGNTLRIKSVKKEDRGTYYCVADNGVSKGD 214
                  .:|.|     :|::.       |.|:..||.|.              |.|         
Zfish   285 EEPVRIPFPNPYQHISSISYN-------PRDNQLYVWNN--------------YIV--------- 319

  Fly   215 RRNINVEVEFAPVITVPRP 233
               :...:||:|    |:|
Zfish   320 ---LRYPLEFSP----PQP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LacNP_523713.2 IG_like 36..131 CDD:214653 16/111 (14%)
FR1 37..50 CDD:409353 4/29 (14%)
Ig strand A' 37..42 CDD:409353 2/21 (10%)
Ig strand B 44..51 CDD:409353 2/6 (33%)
CDR1 51..59 CDD:409353 2/7 (29%)
Ig strand C 59..63 CDD:409353 0/3 (0%)
FR2 60..63 CDD:409353 0/2 (0%)
CDR2 67..81 CDD:409353 2/13 (15%)
Ig strand C' 68..72 CDD:409353 0/3 (0%)
Ig strand C' 79..81 CDD:409353 1/1 (100%)
FR3 84..115 CDD:409353 5/30 (17%)
Ig strand D 84..90 CDD:409353 2/5 (40%)
Ig strand E 94..102 CDD:409353 1/7 (14%)
Ig strand F 108..115 CDD:409353 1/6 (17%)
CDR3 116..124 CDD:409353 0/7 (0%)
FR4 124..130 CDD:409353 0/5 (0%)
Ig strand G 124..130 CDD:409353 0/5 (0%)
Ig_3 134..208 CDD:404760 14/88 (16%)
Ig strand B 153..157 CDD:409353 0/3 (0%)
Ig strand C 166..170 CDD:409353 1/3 (33%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 1/4 (25%)
Ig strand G 215..218 CDD:409353 0/2 (0%)
Ig 227..318 CDD:416386 2/7 (29%)
Ig strand C 256..260 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
adgrl1.1XP_002660669.2 OLF 72..328 CDD:295358 46/270 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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