DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dyb and dmd

DIOPT Version :9

Sequence 1:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001313616.1 Gene:dmd / 83773 ZFINID:ZDB-GENE-010426-1 Length:3609 Species:Danio rerio


Alignment Length:672 Identity:170/672 - (25%)
Similarity:282/672 - (41%) Gaps:141/672 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PRVAILQDLRLQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSE--V 67
            |::|.|.. .|...:::||::||||.|||.:||:..|.|:.:....|||.::.|.    |:|  :
Zfish  2993 PKMAELYQ-SLADLNNVRFSAYRTAMKLRRMQKALCLDLLSMPAACEAFEQHNLK----QNEQFM 3052

  Fly    68 SVARLETLVSSLYHNLNKRLPTAQQVP--VDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATM 130
            .:.::...::|:|..|.::..:...||  ||    :.|||||..|.:..:||||..|.|..:.::
Zfish  3053 DIVQVINCLTSIYDRLEQQHSSLVNVPLCVD----MCLNWLLNVYDTGRAGKIRTLSFKTGIISL 3113

  Fly   131 CSGKLVDKLRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTF----------------H 179
            |...|.||.|::|.:::...|.....:||..|.:.:.:|..:.|..:|                :
Zfish  3114 CKAHLEDKYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 3178

  Fly   180 YKEGLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTG 244
            .|..||..:|        .|:|..     .|..:||||::||:|..||..|...|::|.:....|
Zfish  3179 NKPELEASVF--------LDWMRL-----EPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIG 3230

  Fly   245 FRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQI---GHSLRKSFRCVPEKTV 306
            ||||..:...|.:||.||:.|:.:..|:..:.:.||.:..:..:.:   ...|:..||  .::..
Zfish  3231 FRYRSLKHFNYDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAKVLKNKFR--TKRYF 3293

  Fly   307 QVLPRFPDQPEKTL----NLSHIV----------PP--SPLPSHNGFSDPSGLVHGHHGPHPGLP 355
            ...||....|.:|:    |:...|          ||  ||..||:                    
Zfish  3294 AKHPRMGYLPVQTILEGDNMETPVTLINFWPVDHPPASSPQLSHD-------------------- 3338

  Fly   356 GQHGLFDRSSTLDSRATGRSLDSASGTAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNL 420
                  |..|.::..|: |..:..:.........|:...:.|:||.||..|...|.|  .:|.:.
Zfish  3339 ------DTHSRIEHYAS-RLAEMENRNGSYVNDNVSPNESMDDEHLLIQHYCQSLNQ--GSPLSQ 3394

  Fly   421 PDNATPI----GTDNSRAQRELIAQLESKNKEIMREIARLRRQQETE---------QMAPENP-- 470
            |.:...|    .|:.......::..||.:|:::..|..||::..:.:         ||.|.:|  
Zfish  3395 PQSPAQILISMETEEKGELERVLNDLEQENRKLQAEYDRLKKAHDHKGLSPLPSPPQMLPVSPQS 3459

  Fly   471 ----ALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKNQQTAS-----PRSTPN-S 525
                .||.|.:.|||.||.||..:..|:|..:||..||..|.::|:..||.|     ..|:|: :
Zfish  3460 PRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLTRLRQLLEQPQTESKVNGTALSSPSTA 3524

  Fly   526 SPRSGKSPPMPGGAGILGTSPMSALHAQQMQQHPMAGGVRASQ---------QQLLQQQQQQ-AH 580
            ||||..|              :::|.....|.....|....|.         :.:::|.... .|
Zfish  3525 SPRSDTS--------------LASLRVAASQTTETMGDDELSSPTQDASTGLEDVIEQLNNSFPH 3575

  Fly   581 GHGPFSQSQLEQLNQISSDMRS 602
            ..||...|....::.|...|.|
Zfish  3576 SQGPNVGSLFHMVDNIGHAMES 3597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DybNP_001097287.1 EF-hand_2 7..131 CDD:286194 41/127 (32%)
EF-hand_3 135..223 CDD:286195 25/103 (24%)
ZZ_dystrophin 232..280 CDD:239074 14/47 (30%)
Ribosomal_L29 436..482 CDD:279204 15/60 (25%)
dmdNP_001313616.1 CH 33..136 CDD:237981
CH 152..257 CDD:237981
SPEC 359..577 CDD:238103
SPEC 580..844 CDD:238103
SPEC 741..950 CDD:238103
SPEC 856..1063 CDD:238103
SPEC 1067..1281 CDD:238103
SPEC 1180..1388 CDD:238103
SPEC 1486..1586 CDD:197544
SPEC 1591..1788 CDD:238103
SPEC 1823..1973 CDD:295325
SPEC 2074..2279 CDD:238103
SPEC 2381..2595 CDD:238103
SPEC 2599..2841 CDD:238103
SPEC 2843..>2962 CDD:295325
WW <2973..2995 CDD:238122 1/1 (100%)
EF-hand_2 2997..3114 CDD:286194 40/125 (32%)
EF-hand_3 3118..3209 CDD:286195 25/103 (24%)
ZZ_dystrophin 3218..3266 CDD:239074 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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