DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dyb and Dtnb

DIOPT Version :9

Sequence 1:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_038968415.1 Gene:Dtnb / 362715 RGDID:1309579 Length:654 Species:Rattus norvegicus


Alignment Length:693 Identity:300/693 - (43%)
Similarity:404/693 - (58%) Gaps:110/693 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLRLQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLV 76
            ::|.|.||.||.::||||.|||::||..|||||||||:|||||:||||||:..:|:||:||||::
  Rat    21 EMRAQNFDVIRLSTYRTACKLRFVQKRCNLHLVDIWNMIEAFRDNGLNTLDHATEISVSRLETVI 85

  Fly    77 SSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDKLRY 141
            ||:|:.||||||:..|:.|:....||||:::|||.|:..||:.|||:|..|||||.||::|||||
  Rat    86 SSIYYQLNKRLPSTHQINVEQSISLLLNFMIAAYDSEGRGKLTVFSVKAMLATMCGGKMLDKLRY 150

  Fly   142 IFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMATLMS 206
            ||||:||..|.::..||.:||:|.|.||.||:|.|:|.|.|......||.:.|:.:|.|:.|:|:
  Rat   151 IFSQMSDSNGLMMFGKLDQFLKEALKLPTAVFEGPSFGYTEHAVRTCFPQQKKIMLNMFLDTMMA 215

  Fly   207 EPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNH 271
            :|.|.|||||||:||||.||.:.||..||.||.|:..|||||||:||.|||||.|||.|.....|
  Rat   216 DPPPQCLVWLPLMHRLAHVENVFHPVECSYCHCESMMGFRYRCQQCHNYQLCQNCFWRGHAGGPH 280

  Fly   272 QNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPRFPDQPEKTLNLSHIVPPSPLPSHN- 335
            .|.|::||.||:|||:|::.|::.||..|||.:. ...|.||:||||.|:|:|||||.||.:.| 
  Rat   281 SNQHQMKELSSWKSPAKKLSHAISKSLGCVPSRE-PPHPVFPEQPEKPLDLAHIVPPRPLTNMND 344

  Fly   336 --------GFSDPS-GLVHGHHGPHPGLPGQHGLFDRSSTLDSRATGRSLDSASGTAGTTMSRVA 391
                    |...|: .|.:|...|:. |..:|.|. .|.....:...|.|||.|..         
  Rat   345 TMVSHMSSGVPTPTKRLQYGQDMPNL-LADEHALI-ASYVARLQHCTRVLDSPSRL--------- 398

  Fly   392 AASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDNSRAQRELIAQLESKNKEIMREIARL 456
                 |||||||||||||||.|....:..|.:|: ...|.::.||:|||:||:||:||::||.||
  Rat   399 -----DEEHRLIARYAARLAAEAGNMTRPPTDAS-FNFDANKQQRQLIAELENKNREILQEIQRL 457

  Fly   457 RRQQE-----TEQMAPENPALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKNQQT 516
            |.:.|     |.:.|.:||.|:.|||.|||||.|||..:.|||:|||:||.||||||::||.|.|
  Rat   458 RLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKAQAT 522

  Fly   517 ASPRSTPNSSPRSGKSPPMPGGAGILGTSPMSALHAQQMQQHPMAGGVRASQQQLLQQQQQQAHG 581
            .||.::|...  .|:|.|||..:...|::|.                                  
  Rat   523 GSPHTSPTHG--GGRSMPMPVRSTSAGSTPT---------------------------------- 551

  Fly   582 HGPFSQSQLEQLNQISSDMRSAFAANGSATPPPMRTTTATANVSAIPSLNPISNQNPNLNPDAEL 646
            |||     .:.|:.:..|::.|||                              |....|...:|
  Rat   552 HGP-----QDSLSGVGGDVQEAFA------------------------------QGTRRNLRNDL 581

  Fly   647 NEAADHLTSAISHMVSDLNAGRGRAQQL------GPQPASSIP 683
            ..|||.:|:.:|.:|.:|::|..:...|      .|.|..:||
  Rat   582 LVAADSITNTMSSLVKELHSGETQRFPLVSSSPSCPLPCPTIP 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DybNP_001097287.1 EF-hand_2 7..131 CDD:286194 70/118 (59%)
EF-hand_3 135..223 CDD:286195 45/87 (52%)
ZZ_dystrophin 232..280 CDD:239074 27/47 (57%)
Ribosomal_L29 436..482 CDD:279204 26/50 (52%)
DtnbXP_038968415.1 EFh_DTN 54..214 CDD:320002 87/159 (55%)
EF-hand-like motif 54..94 CDD:320002 26/39 (67%)
EF-hand-like motif 104..138 CDD:320002 16/33 (48%)
EF-hand-like motif 144..180 CDD:320002 20/35 (57%)
EF-hand-like motif 191..214 CDD:320002 7/22 (32%)
ZZ_dystrophin 241..288 CDD:239074 26/46 (57%)
xseA <346..526 CDD:234714 85/196 (43%)
COG1340 434..>515 CDD:224259 46/80 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354119
Domainoid 1 1.000 193 1.000 Domainoid score I3096
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74875
Inparanoid 1 1.050 517 1.000 Inparanoid score I1237
OMA 1 1.010 - - QHG49468
OrthoDB 1 1.010 - - D308769at33208
OrthoFinder 1 1.000 - - FOG0002910
OrthoInspector 1 1.000 - - otm45118
orthoMCL 1 0.900 - - OOG6_105554
Panther 1 1.100 - - O PTHR12268
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2279
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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