DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dyb and beta-Spec

DIOPT Version :9

Sequence 1:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001259660.1 Gene:beta-Spec / 32746 FlyBaseID:FBgn0250788 Length:2308 Species:Drosophila melanogaster


Alignment Length:897 Identity:158/897 - (17%)
Similarity:269/897 - (29%) Gaps:369/897 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLETLVSSLYHN- 82
            |..::...|..:.:.|.|...:...||.|.         |:||...|...|.|.|..|.||... 
  Fly   728 DLTKYRRQRLENAVEYFQLFADADDVDNWM---------LDTLRIVSSEDVGRDEANVQSLLKKH 783

  Fly    83 ----------------LNK-----RLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVA 126
                            |:|     :|..|::..||.:...:          ||.     :.....
  Fly   784 KDVADELKNYAEVIDALHKQAESLKLNEAEKANVDKRLEAI----------DNR-----YKELTE 833

  Fly   127 LATMCSGKLVDKLR-YIFSQISDGAGQLVAWKL--------GEFLREVLALPAAVYESPTFHYKE 182
            ||.:...:|:|.|. |.....:||..|.:..|.        |:.:.:|..:.         |..|
  Fly   834 LAKLRKQRLLDAL
SLYKLMSEADGVEQWIKEKTKMLDTMTPGKDIEDVEIMK---------HRFE 889

  Fly   183 GLEEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRY 247
            |.::|:....::|.|.:.:|.             .|:|       :.||....:..::|      
  Fly   890 GFDKEMNANASRVAVVNQLAR-------------QLLH-------VEHPNSDEILERQN------ 928

  Fly   248 RCQRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKTVQVLPRF 312
                    .|.||  |           ..::|.:..|....:..|.: ::|.....:|:..:   
  Fly   929 --------HLNQE--W-----------STLREKAEAKMDDLKSAHGV-QTFYIECRETISWI--- 968

  Fly   313 PDQPEKTLNLSHIVPPSPLPSHNGFSDPSGLVHGHHGPHPGLPGQHGLFDRSSTLDSRATGRSLD 377
             :..::.|..:..:.          .|.:|::                     ||..|.:|...|
  Fly   969 -EDKKRILTETDSLE----------MDLTGVM---------------------TLQRRLSGMDRD 1001

  Fly   378 SASGTAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNLPDNATPIGTDNSRAQRELIAQL 442
            .|:..|..:.....|.|..||.                     |:.|..|        ||.|||:
  Fly  1002 LAAIQAKLSSLEREANSIEDEH---------------------PEEAKII--------RERIAQI 1037

  Fly   443 E--------------SKNKE------IMREIARLR----------RQQETEQMAPENPALINELR 477
            |              ||.:|      .:|::...:          ..::|....||...|:|:.:
  Fly  1038 ELIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQTWLTKTQTDVASEDTPTSLPEAEKLLNQHQ 1102

  Fly   478 ALRQ-------------RKGE----------------LEGHLGALQDSRRQLMEQLEGLMRMLKN 513
            ::|:             ..||                |...|.||:|.       .|.|.:|.:|
  Fly  1103 SIREEIDNYTEDYKNMMEYGERLTSEGSTSDDPQYMFLRERLNALKDG-------WEELHQMWEN 1160

  Fly   514 QQTASPRSTPNSSPRSGKSPPMPGGAGILGTSPMSALHAQQMQQHPMAGGVRASQQQLLQQQQQQ 578
            :|                                 .|.:|.:.|.......|.::..|.||:...
  Fly  1161 RQ---------------------------------VLLSQSLDQQLFNRDARQTEVLLSQQEHFL 1192

  Fly   579 AHGHGPFSQSQLEQLNQISSDMRSAFAANGSATPPPMRTTTATANVSAIPSLNPISN---QNPNL 640
            :....|.:..|.|  ||:.  ...||            .||..||...|.:|..:::   :..:.
  Fly  1193 SKDDTPVNLEQAE--NQLK--RHEAF------------LTTMEANDDKINTLLQVADTLVEKDHF 1241

  Fly   641 NPDAELNEAADHLTSAISHMVSDLNAGRGRAQQLGPQPASSIPQARFIMPLEFRHIEGGESEDSS 705
            :.| ::.:.|:::|..     .|.|  |.||.....:..:.:....|:..||             
  Fly  1242 DAD-KIGKRAENITGR-----RDDN--RQRALDQHEKLKNQVKLHEFLQDLE------------- 1285

  Fly   706 QCECNDCECGEY-EEVFRTDED------------------LECEGAAAPFGNAYSLFPTSGVHEE 751
                   |..|: :|.:.|.:|                  .|.|.||    |...||...     
  Fly  1286 -------ELAEWVQEKYATSQDESYRSAKTIHSKWTRHQAFEAEIAA----NKERLFEAE----- 1334

  Fly   752 DHFDYTFGQGEELSQVNRILGYRNHPELFIDDEQAGFPALHEIGETIDELQL 803
                   ...:|||        :..|| |.|..:   |.|.|:.:..|:|::
  Fly  1335 -------KSAQELS--------KEKPE-FKDVIE---PKLKELAKQFDDLEV 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DybNP_001097287.1 EF-hand_2 7..131 CDD:286194 27/133 (20%)
EF-hand_3 135..223 CDD:286195 19/96 (20%)
ZZ_dystrophin 232..280 CDD:239074 5/47 (11%)
Ribosomal_L29 436..482 CDD:279204 16/88 (18%)
beta-SpecNP_001259660.1 CH 51..149 CDD:278723
CH 170..269 CDD:278723
Spectrin 298..408 CDD:278843
SPEC 422..521 CDD:197544
SPEC 525..740 CDD:238103 2/11 (18%)
SPEC 639..846 CDD:238103 29/141 (21%)
SPEC 848..1058 CDD:238103 53/330 (16%)
SPEC 955..1169 CDD:238103 49/317 (15%)
SPEC 1170..1380 CDD:238103 53/270 (20%)
SPEC 1386..1484 CDD:197544
SPEC 1488..1699 CDD:238103
SPEC 1594..1806 CDD:238103
SPEC 1807..2015 CDD:238103
Spectrin 2018..>2078 CDD:278843
PH 2167..2275 CDD:278594
PH_beta_spectrin 2167..2274 CDD:269975
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439892
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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