DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dyb and Actn

DIOPT Version :10

Sequence 1:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_477485.1 Gene:Actn / 31166 FlyBaseID:FBgn0000667 Length:917 Species:Drosophila melanogaster


Alignment Length:811 Identity:151/811 - (18%)
Similarity:251/811 - (30%) Gaps:298/811 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EAFRENGLNTLEPQSEVSVARLETLVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSD-- 113
            |.:...||  |:|..|..  :.:|..:....:|.|.......:..|.:.||.|..||...:.:  
  Fly    20 EEWEREGL--LDPAWEKQ--QKKTFTAWCNSHLRKAGTAIDNIEEDFRNGLKLMLLLEVISGETL 80

  Fly   114 ---NSGKIRVFSIKVALATMCSGKLVDKLRYIFSQ----ISDGAGQLVAWKLGEFLREV------ 165
               :.||:|...|         ..:...|.:|.|:    :|.||.::|...|...|..:      
  Fly    81 PKPDRGKMRFHKI---------ANVNKALDFIASKGVHLVSIGAEEIVDGNLKMTLGMIWTIILR 136

  Fly   166 LALPAAVYESPTFHYKEGL----EEEIFPAENKVTVNDFMATLMSEPGPSCLVWLPLVHRLATVE 226
            .|:.....|..|  .||||    :.:..|.:| |.|.:|  .|..:.|   |.:..|:||     
  Fly   137 FAIQDISVEEMT--AKEGLLLWCQRKTAPYKN-VNVQNF--HLSFKDG---LAFCALIHR----- 188

  Fly   227 TIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTSLNHQNDHEVKEYSSYKSPSKQIG 291
                       |:.:...:                     ..|:..|..|               
  Fly   189 -----------HRPDLIDY---------------------AKLSKDNPLE--------------- 206

  Fly   292 HSLRKSFRCVPEKTVQVLPRFPDQPEKTLNLSHIVPPSPLPS-----------HNGFSDPSGLVH 345
             :|..:|. |.||.:.: ||..| |:..:|       :|.|.           ::.|.....:.:
  Fly   207 -NLNTAFD-VAEKYLDI-PRMLD-PDDLIN-------TPKPDERAIMTYVSCYYHAFQGAQQVGN 260

  Fly   346 GHHGPHPG-----LPGQHGLFDRSSTLDSRATGRSLDSASGTAGTTMSRVA-AASANDEEHRLIA 404
            ..|.|.|.     :|..:                       .|.|..:|:. ....|.|..||:.
  Fly   261 VTHVPEPTRQYTYVPNNY-----------------------NAETAANRICKVLKVNQENERLME 302

  Fly   405 RYAARLAQE-----NRAPSNLPDNATPIGTDNSRAQRELIAQLESKNKEIMREIARLRRQQETEQ 464
            .| .|||.:     .|....|          |||.....:|.::.|    :.|....||:.:..:
  Fly   303 EY-ERLASDLLEWIRRTMPWL----------NSRQADNSLAGVQKK----LEEYRTYRRKHKPPR 352

  Fly   465 MAPENPALINELRALRQRKGELEGHLGALQDSRRQLMEQLEGLMRMLKNQQTASPRSTPNSSPRS 529
            :               ::|.:||.:...||...|            |.|:        |...|..
  Fly   353 V---------------EQKAKLETNFNTLQTKLR------------LSNR--------PAYLPTE 382

  Fly   530 GKSPPMPGGAGILGTSPMS------ALHAQQMQQHPMAGGVRASQ-QQLLQQQQQQAHGHGPFSQ 587
            ||:           .|.:|      .|..:..::..:|..:|..: :.|.|:.:.:|..|..:::
  Fly   383 GKT-----------VSDISNSWKGLELAEKAFEEWLLAETMRLERLEHLAQKFKHKADAHEDWTR 436

  Fly   588 SQLEQLNQISSDMRSAFAANGSATPPPMRTTTATANVSAIPSLNPISNQNPNLNPDAELNEAADH 652
            .:.|.|.  |.|.|..                         .||       .|....:.:||.: 
  Fly   437 GKEEMLQ--SQDFRQC-------------------------KLN-------ELKALKKKHEAFE- 466

  Fly   653 LTSAISHMVSDLNAGRGRAQQLGPQPASSIPQARFIMPLEFRHIEGGESEDSSQCECNDCECGEY 717
                     |||.|.:.|.:|:     ::|.|.  :..||:.......:.....|:..| ..|..
  Fly   467 ---------SDLAAHQDRVEQI-----AAIAQE--LNTLEYHDCVSVNARCQRICDQWD-RLGAL 514

  Fly   718 EEVFRTDED-------------LECEGAAAPFGN--------------AYSLFPTSG-VHEEDHF 754
            .:..||..|             ||....||||.|              .:::....| :...|.|
  Fly   515 TQRRRTALDEAERILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQF 579

  Fly   755 DYTFGQGEELSQVNRILGYRNHPELFIDDEQ 785
            ..|.|:.::  :.|.|:......|..:...|
  Fly   580 KATLGEADK--EFNLIVNLVREVESIVKQHQ 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DybNP_001097287.1 EFh_DTN 45..205 CDD:320002 40/172 (23%)
EF-hand-like motif 45..86 CDD:320002 8/34 (24%)
EF-hand-like motif 95..129 CDD:320002 10/38 (26%)
EF-hand-like motif 135..171 CDD:320002 10/45 (22%)
EF-hand-like motif 182..205 CDD:320002 8/26 (31%)
ZZ_dystrophin 232..280 CDD:239074 4/47 (9%)
CwlO1 376..691 CDD:443091 60/327 (18%)
ClpA <430..>514 CDD:440308 15/83 (18%)
ActnNP_477485.1 CH_ACTN_rpt1 31..135 CDD:409063 23/114 (20%)
CH_ACTN_rpt2 139..252 CDD:409065 33/183 (18%)
SPEC 302..525 CDD:238103 61/335 (18%)
SPEC 420..647 CDD:238103 46/243 (19%)
SPEC 538..760 CDD:238103 15/73 (21%)
EFh 775..842 CDD:238008
EFhand_Ca_insen 847..913 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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