DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dyb and dyb-1

DIOPT Version :9

Sequence 1:NP_001097287.1 Gene:Dyb / 36362 FlyBaseID:FBgn0033739 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_490860.1 Gene:dyb-1 / 171715 WormBaseID:WBGene00001115 Length:590 Species:Caenorhabditis elegans


Alignment Length:680 Identity:259/680 - (38%)
Similarity:359/680 - (52%) Gaps:165/680 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILQDLRLQTFDSIRFASYRTASKLRYIQKSTNLHLVDIWNVIEAFRENGLNTLEPQSEVSVARLE 73
            ::.::|||.|||||||:||.|.|||:||:.|.:|||||||:||||||||||.|...:.:..:|.|
 Worm    39 LIDEMRLQDFDSIRFATYRAACKLRFIQQKTKVHLVDIWNMIEAFRENGLNALPLHTVIKTSRAE 103

  Fly    74 TLVSSLYHNLNKRLPTAQQVPVDSKAGLLLNWLLAAYTSDNSGKIRVFSIKVALATMCSGKLVDK 138
            .|:::::|||||||..:|.|..|....|||.:||.||...|:|::.||||||||||:|:||||||
 Worm   104 LLLTTVFHNLNKRLVASQHVDTDVSISLLLAFLLGAYDKQNTGRLTVFSIKVALATLC
AGKLVDK 168

  Fly   139 LRYIFSQISDGAGQLVAWKLGEFLREVLALPAAVYESPTFHYKEGLEEEIFPAENKVTVNDFMAT 203
            ||||||||:|..|.:...|..:||:::|:|..||:|:|||.:.|....:.|..:.||::|.|:.|
 Worm   169 LRYIFSQIADSNGLMDHIKFTDFLQQILSLTTAVFEAPTFGFSENAVNQCFHKDEKVSLNVFLDT 233

  Fly   204 LMSEPGPSCLVWLPLVHRLATVETIVHPTVCSVCHKENFTGFRYRCQRCHAYQLCQECFWHGKTS 268
            .:|:|.|.|::||||:||:|:|..:.||.||..|...:||||||:||||..|||||.|||.|:||
 Worm   234 FLSDPCPPCIMWLPLLHRMA
SVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTS 298

  Fly   269 LNHQNDHEVKEYSSYKSPSKQIGHSLRKSFRCVPEKT-----------VQVLPRFPDQPEKTLNL 322
            .||.|:||:|||||||||:||:.||:.||.:|:|..:           .::......:|.:.|||
 Worm   299 QNHSNEHEMKEYSSYKSPTKQLVHSIHKSLQCIPATSTVGDANIDIFNAKIGGPVSSKPARPLNL 363

  Fly   323 SHIVPPSPLP---SHNGFSD---PSGLVHGHHGPHPGLPGQ--HGLFDRSSTLDSRATGRSLDSA 379
            ::|||.:|..   .|...|.   |:..|.        ||||  ||                    
 Worm   364 NNIVPATPTTIRRQHAATSSADWPTSPVL--------LPGQASHG-------------------- 400

  Fly   380 SGTAGTTMSRVAAASANDEEHRLIARYAARLAQENRAPSNLPD----NATPIGTDNSRAQRELIA 440
                          ...|:||:|||||||:|:  .||...|.:    |::.:|.     :|.|||
 Worm   401 --------------GVIDDEHKLIARYAAKLS--GRADYPLSNGRSMNSSMVGD-----ERTLIA 444

  Fly   441 QLESKNKEIMREIARLRRQQETEQMAPENPALINELRALRQRKGELEGHLGALQDSRRQLMEQLE 505
            |||.:|..::||:|||..|..::          :.|..||.||.|||..:..:|..||:||.|||
 Worm   445 QLEEENSMMVREMARLESQTTSD----------DGLAGLRDRKMELEEKMFEMQQRRRELMMQLE 499

  Fly   506 GLMRMLKNQQTASPRSTPNSSPRSGKSPPMPGGAGILGTSPMSALHAQQMQQHPMAGGVRASQQQ 570
            .||..|            |:.|:                              |..|...||..|
 Worm   500 HLMAQL------------NTGPQ------------------------------PSGGVSSASLSQ 522

  Fly   571 LLQQQQQQAHGHGPFSQSQLEQLNQISSDMRSAFAANGSATPPPMRTTTATANVSAIPSLNPISN 635
            |            ||:.|. :||..::|.:.:||.| ||.                         
 Worm   523 L------------PFTASD-QQLTGVNSTVANAFRA-GSL------------------------- 548

  Fly   636 QNPNLNPDAELNEAADHLTSAISHMVSDLN 665
              |..:...:|..|||.:|:.:|.:|..|:
 Worm   549 --PATSLQGDLLHAADQITTNMSDLVRQLD 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DybNP_001097287.1 EF-hand_2 7..131 CDD:286194 69/121 (57%)
EF-hand_3 135..223 CDD:286195 42/87 (48%)
ZZ_dystrophin 232..280 CDD:239074 30/47 (64%)
Ribosomal_L29 436..482 CDD:279204 17/45 (38%)
dyb-1NP_490860.1 EF-hand_2 38..161 CDD:286194 69/121 (57%)
EF-hand_3 165..253 CDD:286195 42/87 (48%)
ZZ_dystrophin 262..310 CDD:239074 30/47 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167565
Domainoid 1 1.000 147 1.000 Domainoid score I2785
eggNOG 1 0.900 - - E1_KOG4301
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74875
Inparanoid 1 1.050 413 1.000 Inparanoid score I1037
Isobase 1 0.950 - 0 Normalized mean entropy S3868
OMA 1 1.010 - - QHG49468
OrthoDB 1 1.010 - - D308769at33208
OrthoFinder 1 1.000 - - FOG0002910
OrthoInspector 1 1.000 - - oto18631
orthoMCL 1 0.900 - - OOG6_105554
Panther 1 1.100 - - LDO PTHR12268
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2496
SonicParanoid 1 1.000 - - X2279
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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