DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and usp12b

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_688359.3 Gene:usp12b / 559878 ZFINID:ZDB-GENE-100209-4 Length:383 Species:Danio rerio


Alignment Length:452 Identity:118/452 - (26%)
Similarity:178/452 - (39%) Gaps:104/452 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 ELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFS 383
            |:.:..:|.........|..||.|.:.....|....  ..||||.|||||.|||||||.....|.
Zfish     2 EILMTVRKIASICTMGANASALEKEIGPEQFPVNEH--YFGLVNFGNTCYCNSVLQALYFCRPFR 64

  Fly   384 RQIL-----------LIEC-----NSVLLMKVQQQIALMHHSLRYELTPSRVLNATRPPS--FTP 430
            .::|           |:.|     ||:...|.:..:          :.|.:.::..|..:  |..
Zfish    65 EKVLAYKIQPRRKESLLTCLADLFNSIATQKKKVGV----------IPPKKFISRLRKENELFDN 119

  Fly   431 GLQQDSSEFLGYLL----DLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYN 491
            .:|||:.|||.|||    |||.|.:                           |::...:|.:..|
Zfish   120 YMQQDAHEFLNYLLNTIADLLQEEK---------------------------SQERQQNGKVVQN 157

  Fly   492 SKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPST-IDKTFAGKLSTTYRC 555
            ........||.|..                       |:...:.|...| :.:.|.|.|:...||
Zfish   158 GGSGSGGGGSGSST-----------------------GEGETEEKTQQTWVHEIFQGTLTNETRC 199

  Fly   556 LNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAE 620
            |||...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|..:.:|:|.||:...:|:
Zfish   200 LNCEAVSSKDEDFLDLSV----DVEQ----NTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 256

  Fly   621 RHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGV 685
            :.:.|.:.|..|.|.||:|||..:.|..|||.::|.....:.:..::.|:......  |||.|.|
Zfish   257 KRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRL--YDLVAVV 319

  Fly   686 VHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNLTS-----PNTPYILFYK 739
            ||.|...:.|||.|...... .|..|:|::|..   ...||.:.|||     ..:.|||||:
Zfish   320 VHCGSGPNRGHYITIVKSHG-FWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 109/410 (27%)
Peptidase_C19H 359..739 CDD:239129 110/410 (27%)
usp12bXP_688359.3 UCH 38..379 CDD:278850 109/411 (27%)
Peptidase_C19G 40..380 CDD:239128 110/410 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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