DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and usp12b

DIOPT Version :10

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_688359.3 Gene:usp12b / 559878 ZFINID:ZDB-GENE-100209-4 Length:383 Species:Danio rerio


Alignment Length:452 Identity:118/452 - (26%)
Similarity:178/452 - (39%) Gaps:104/452 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 ELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFS 383
            |:.:..:|.........|..||.|.:.....|....  ..||||.|||||.|||||||.....|.
Zfish     2 EILMTVRKIASICTMGANASALEKEIGPEQFPVNEH--YFGLVNFGNTCYCNSVLQALYFCRPFR 64

  Fly   384 RQIL-----------LIEC-----NSVLLMKVQQQIALMHHSLRYELTPSRVLNATRPPS--FTP 430
            .::|           |:.|     ||:...|.:..:          :.|.:.::..|..:  |..
Zfish    65 EKVLAYKIQPRRKESLLTCLADLFNSIATQKKKVGV----------IPPKKFISRLRKENELFDN 119

  Fly   431 GLQQDSSEFLGYLL----DLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYN 491
            .:|||:.|||.|||    |||.|.:                           |::...:|.:..|
Zfish   120 YMQQDAHEFLNYLLNTIADLLQEEK---------------------------SQERQQNGKVVQN 157

  Fly   492 SKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPST-IDKTFAGKLSTTYRC 555
            ........||.|..                       |:...:.|...| :.:.|.|.|:...||
Zfish   158 GGSGSGGGGSGSST-----------------------GEGETEEKTQQTWVHEIFQGTLTNETRC 199

  Fly   556 LNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAE 620
            |||...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|..:.:|:|.||:...:|:
Zfish   200 LNCEAVSSKDEDFLDLSV----DVEQ----NTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 256

  Fly   621 RHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGV 685
            :.:.|.:.|..|.|.||:|||..:.|..|||.::|.....:.:..::.|:......  |||.|.|
Zfish   257 KRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRL--YDLVAVV 319

  Fly   686 VHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNLTS-----PNTPYILFYK 739
            ||.|...:.|||.|...... .|..|:|::|..   ...||.:.|||     ..:.|||||:
Zfish   320 VHCGSGPNRGHYITIVKSHG-FWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 Peptidase_C19H 359..739 CDD:239129 110/410 (27%)
usp12bXP_688359.3 Peptidase_C19G 40..380 CDD:239128 110/410 (27%)

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