DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DUBAI and puf

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster


Alignment Length:891 Identity:174/891 - (19%)
Similarity:283/891 - (31%) Gaps:316/891 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PRLKEDVCQVGAF-LATRNEKFHQMFYLRVVYELIT-----------------------KSPFEP 151
            |.::.::| .|.: :...|...:::....::::||.                       |.|:.|
  Fly  1788 PAVRREIC-AGLYRICLGNAHSYRLLLAPLLHKLIALLPLAEQMSSGNQHTQFLLSEEGKDPYGP 1851

  Fly   152 PPSCAVAIVFQLFDSTQILEAVHSLLEQNVQDSSIKKTVNLLCDWITYCTFCSTLNLWVLALLKG 216
                |....|.|     :...|.:|..:.|.:..|  .:.:||:.|:.    |.|......|..|
  Fly  1852 ----ACRDYFWL-----LARLVDTLSPEMVAEEHI--DIEMLCESISQ----SILTREYYELRHG 1901

  Fly   217 LRDQGKMALLDEIAMDNIEKLFHVMIFPALRQKAAPVVFHMLSTINQTPEVFHKILPRIPRVLQY 281
            .:|.|.:.||:  .|.|:.|..                    :|...||    |.|..|.:::.:
  Fly  1902 YQDDGLVGLLN--LMSNLIKYD--------------------TTFKYTP----KALSFIEQLIGF 1940

  Fly   282 VKNQSTTMDEIGLETKKCLQQLVDLTSALMLRFYDQDELYVATKKALQTYEPSPNCVALAKAMHE 346
            :.:..:..|.   :..|| :......||     ||   |.|...:...|.....:...||:....
  Fly  1941 LFDMPSPADR---QKPKC-KSASSRASA-----YD---LLVELCRGCATNYAYLHGRLLAQHKSG 1993

  Fly   347 NAQP-----WGRRNAR-----VGLVNLGNTCYMNSVLQALAMTSDFSRQILLIECNSV-----LL 396
            ..||     |.|...|     |||.|||.||||.|.:|.|.|.......:|.:..|:.     .|
  Fly  1994 PKQPYPWDYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPNAARKHGPTL 2058

  Fly   397 MKVQQQIALMHHSLRYELTP---SRVLNATRPPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVT 458
            :::|:..|.:..|.|....|   .||......|..| |.|:|.:||   .:||:.:.|       
  Fly  2059 LELQRMFAYLLESERKSYNPRSFCRVYQMDHQPLNT-GEQKDMAEF---FIDLVSKLE------- 2112

  Fly   459 GHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATN 523
                         |..|.|                             .|               
  Fly  2113 -------------DMTPDL-----------------------------KH--------------- 2120

  Fly   524 GLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYS 588
                            .:.:.|.|.||.....|:||..||..:.|..::....|.:        :
  Fly  2121 ----------------LVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMR--------N 2161

  Fly   589 VQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPK-----------NLILTLKQ---- 638
            :|:.::.....:.|:|||.|.|.||.|...||:.....:.|:           |::..||:    
  Fly  2162 LQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNT 2226

  Fly   639 -----FKYDQKYHFRTKLMHKVFHDE-------------------SVTVKMSAKDSLQEMSTVHY 679
                 .:.:..::....||.:.:.:|                   :...:.:..|.::|  ...|
  Fly  2227 HFSFPLRLNMCHYVEKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEE--CYEY 2289

  Fly   680 DLYAGVVHAGYSMDSGHYFTFAADQAK-------NWYKFNDNVVTHSKPE---------EMHNLT 728
            :|....||.| :.|.|||::|..::.|       .|:.|||..|....|.         ||.:.|
  Fly  2290 ELVGVTVHTG-TADGGHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKT 2353

  Fly   729 --------------SPNTPYILFY--KMCGHSNESNS---VTAS------------------CSS 756
                          ..|:.|:|||  ::..|....:|   ||.:                  .||
  Fly  2354 YDSVTEKYLDFSFEKTNSAYMLFYERRLPEHLQRRHSELLVTPTPSPTVEEKSEAEEPTKMETSS 2418

  Fly   757 SMVSGSNDQVVSV-------PLSPPLKLEELPRRLRDYVRKDNHVYNEELKMQRFKRGNSGHGNA 814
            |.:....|..|.|       |.....:.:|.|.:......|......||.|::  |:...|.   
  Fly  2419 SEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQDEPEEKKIE--KQSREGE--- 2478

  Fly   815 FVSRHNFDGDGDEDDKAP------------PPPGGCGGNGLGMNIN 848
                     :..|.|:.|            .|...|..:....|.|
  Fly  2479 ---------EKSETDEKPTEMTTVSTEEEKQPTANCDNHQQNNNSN 2515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 93/456 (20%)
Peptidase_C19H 359..739 CDD:239129 94/458 (21%)
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 95/463 (21%)
UCH 2014..2377 CDD:278850 93/457 (20%)
DUF3517 2723..>2877 CDD:288853
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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