DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DUBAI and scny

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster


Alignment Length:555 Identity:124/555 - (22%)
Similarity:205/555 - (36%) Gaps:166/555 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 PSPNCVALAKAMHENAQPWGRRNAR-----VGLVNLGNTCYMNSVLQAL----AMTSDF-SRQIL 387
            |.|..|...:   ||.:...:::.|     .|::|:|||||:||.||||    |:.:.. |.|..
  Fly   145 PKPKRVLYPR---ENIRIGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAH 206

  Fly   388 LIECN-----SVLLMKVQQQIALMHHSLRYELTPSRVLNATRP--PSFTPGLQQDSSEFLGYLLD 445
            |.:||     |..::....:..|...|.:..:.|..:.:..:.  .....|.|:|:.|||.:|::
  Fly   207 LADCNVAEPGSGCIICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVE 271

  Fly   446 LLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKP 510
            .:....:....                                                  |:| 
  Fly   272 AMERAYLMRFR--------------------------------------------------NYK- 285

  Fly   511 TPTPPATPTKATNGLKQQGQQVDQ-AKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLS 574
                                ::|| .|..:.:.:.|.|.|.:..|||:|...|.....|::|.|.
  Fly   286 --------------------ELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLD 330

  Fly   575 FPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQF 639
            .  .|.|      |::|..|.:.|.|:|: |..|.|..|||...|.:...:.:||..|.:.||:|
  Fly   331 I--RKAD------SLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRF 386

  Fly   640 -----KYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGVVHAGYSMDSGHYFT 699
                 |..::..|::::      |.|   |.:|:....:...:.|.|.:.|.|.|.|...|||..
  Fly   387 SMIGNKLTKQISFKSRI------DLS---KYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTA 442

  Fly   700 FAADQAKNWYKFNDNVVTHSKPEEMHNLTSPNTPYILFYKMCGHSNESNSVTASCSSSMVSG--- 761
            ..:....::|.|:|:.|   :|..||::.:.|. ||:|:::      ..|..||.:::..:|   
  Fly   443 IGSTDTGSFYNFDDSYV---RPIAMHSVCNTNA-YIMFFEL------DLSQAASPAANRPNGVRL 497

  Fly   762 ----SNDQVVSVPLSPPLKLEELPRRLRDYVRKDNHVYNEELKMQRFKRGNSGH--GNAFVSRHN 820
                |...|.:..:|.|     .|.|.              :..|....|.:|:  |||..:...
  Fly   498 TNGHSTTPVPAATVSSP-----SPTRF--------------IGPQLPAGGANGYTNGNAQKTAIQ 543

  Fly   821 FD-------------GDGDEDDKAPPPPGGCGGNG 842
            |.             |.|...|.|.||..|....|
  Fly   544 FKQQNQQSPQNGLQLGTGKFQDTAKPPLVGAHAKG 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 92/397 (23%)
Peptidase_C19H 359..739 CDD:239129 93/397 (23%)
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 92/398 (23%)
UCH 172..477 CDD:278850 92/397 (23%)
Asp-B-Hydro_N <617..>731 CDD:191249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468761
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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