DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and Usp14

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001260321.1 Gene:Usp14 / 34387 FlyBaseID:FBgn0032216 Length:475 Species:Drosophila melanogaster


Alignment Length:470 Identity:102/470 - (21%)
Similarity:164/470 - (34%) Gaps:122/470 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 LYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFSR 384
            |.:.:|:::.....:|  |...:.|:| |:.........||.|||||||||:.:|.|....:...
  Fly    69 LLLGSKESVPEVPATP--VKFIEDMNE-AEAATAMRLPAGLTNLGNTCYMNATVQCLNAVPELRT 130

  Fly   385 QILLIECNSVLLMKVQQQIALMHHSLRYEL------TPSRVLNATR--PPSFTPG------LQQD 435
            .:.....:....|.....|:....|:..::      ||..:|.|..  .|.|...      .|||
  Fly   131 ALSTFSNDGTDTMSTAFSISSAMKSIFAQMEKGTTVTPIVLLQALHRASPQFAQTGENGTYRQQD 195

  Fly   436 SSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHELSSG 500
            ::|....:|.:|.:..                 |..:..|:...:...||.:..:.....|:...
  Fly   196 ANECWAEILKMLQQKL-----------------RPKNQEPSNTVQKRHSSFIDQFFGGTFEVKMS 243

  Fly   501 SNSDNCNHKPTPTPPATPTKAT----------------NGLKQQGQQVDQAKPPSTIDKTFAGKL 549
            |..|       |..|:|.|...                :|||.:.:: ...|...|:.:.  .|.
  Fly   244 SEED-------PDEPSTVTSENFLQLSCFISMDVKYMQSGLKSKMKE-QLVKKSETLGRD--AKY 298

  Fly   550 STTY--------------RCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPE 600
            ..||              |....|.|..|....::::  ||.|           .|..| .|:||
  Fly   299 IRTYLVSRLPAYLTVQFVRFQYKGKEGINAKVLKDIK--FPID-----------FDAFE-LCTPE 349

  Fly   601 ---KLDGDNQYFCPQCKKLCDAE-RHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESV 661
               ||       ||...|..|.| :.:.|....:|   ...:.|.|.||       .:.:.|   
  Fly   350 LQNKL-------CPMRSKFKDLEDKKMEVDVVKRN---EPNEEKKDVKY-------EQFWFD--- 394

  Fly   662 TVKMSAKDSLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTHSKPEEMHN 726
                   |.|...::.:|.|.|.:.|.|.|..||||..:.......|:||:|:.|:....:|:..
  Fly   395 -------DDLGSNNSGYYTLQAVLTHKGRSSSSGHYVAWVRSSGDVWFKFDDDEVSAVATDEILR 452

  Fly   727 LTSP---NTPYILFY 738
            |:..   :..|:|.|
  Fly   453 LSGGGDWHCAYVLLY 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 94/430 (22%)
Peptidase_C19H 359..739 CDD:239129 95/431 (22%)
Usp14NP_001260321.1 UBQ 4..73 CDD:214563 1/3 (33%)
UBQ 5..73 CDD:294102 1/3 (33%)
UCH 103..467 CDD:278850 94/431 (22%)
Peptidase_C19A 105..467 CDD:239122 94/429 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456877
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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