DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and Usp27x

DIOPT Version :10

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001388057.1 Gene:Usp27x / 302566 RGDID:1564628 Length:438 Species:Rattus norvegicus


Alignment Length:423 Identity:95/423 - (22%)
Similarity:151/423 - (35%) Gaps:126/423 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GLVNLGNTCYMNSVLQALAMT---SDF-----------SRQILLIECNSVLLMKVQQQIALMHHS 409
            ||:||||||:||.::|||..|   .||           |.::.|:...|.|..::.......|  
  Rat    79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNPSPH-- 141

  Fly   410 LRYELTPSRVLNATRPPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDV 474
            :.|:|.....::|.....:.   |||:.|||...||:||.|      ..|..||           
  Rat   142 VPYKLLHLVWIHARHLAGYR---QQDAHEFLIAALDVLHRH------CKGDDVG----------- 186

  Fly   475 PALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPS 539
                                   ...||.::||                               .
  Rat   187 -----------------------KVASNPNHCN-------------------------------C 197

  Fly   540 TIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDD----------KEDC--------GATN 586
            .||:.|.|.|.:...|..|...|...|...::.|..|..          :|..        |.| 
  Rat   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESHIPGVT- 261

  Fly   587 YSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYH----- 646
             ::.|.:..:..||.|....:..|..|:...::.:.:.:.:.|.......|:|::..|..     
  Rat   262 -TLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITT 325

  Fly   647 ---FRTKLMHKVFHDESVTVKMSAKDSLQEMSTVH---YDLYAGVVHAGYSMDSGHYFTFAADQA 705
               |..:|....|...|...:|:.:..|...|..:   |.|:|.|.|.| :::||||.:|.....
  Rat   326 YISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHR 389

  Fly   706 KNWYKFNDNVVTHSKPEEMHNLTSPNTPYILFY 738
            ..|:|.:|.|:|.:..:::  |.|..  |:|||
  Rat   390 DQWFKCDDAVITKASIKDV--LDSEG--YLLFY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 Peptidase_C19H 359..739 CDD:239129 95/423 (22%)
Usp27xNP_001388057.1 Peptidase_C19D 78..419 CDD:239125 95/423 (22%)

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