DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and Usp46

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_006250950.1 Gene:Usp46 / 289584 RGDID:1564808 Length:406 Species:Rattus norvegicus


Alignment Length:469 Identity:126/469 - (26%)
Similarity:186/469 - (39%) Gaps:119/469 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 KCLQQLVDLTSALMLRFYDQDELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVN 362
            :|.:||..||         .|....||....:.:. ..|..||.|.:.....|....  ..||||
  Rat    27 RCNRQLSGLT---------WDPPLSATFSGHRAFS-GTNASALEKDIGPEQFPINEH--YFGLVN 79

  Fly   363 LGNTCYMNSVLQALAMTSDFSRQILLIECNSVLLMKVQQQ--------IALMHHSLRYE------ 413
            .|||||.|||||||.....|.        .:||..|.||:        :|.:.||:..:      
  Rat    80 FGNTCYCNSVLQALYFCRPFR--------ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGV 136

  Fly   414 LTPSRVLNATRPPS--FTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDVPA 476
            :.|.:.::..|..:  |...:|||:.|||.|||:.:                             
  Rat   137 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTI----------------------------- 172

  Fly   477 LLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPST- 540
               .|||.      ..|..|..:|                   |..||  ...:..:.:||..| 
  Rat   173 ---ADILQ------EEKKQEKQNG-------------------KLKNG--NMNEPAENSKPELTW 207

  Fly   541 IDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGD 605
            :.:.|.|.|:...|||||...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|..:
  Rat   208 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSV----DVEQ----NTSITHCLRDFSNTETLCSE 264

  Fly   606 NQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKD- 669
            .:|:|..|....:|::.:.|.:.|..|.|.||:|||.::.|..|||.::|.....:.:..::.| 
  Rat   265 QKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDA 329

  Fly   670 -SLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNLTS- 729
             :|..|    |||.|.|||.|...:.|||.|...... .|..|:|::|..   ...||.:.||| 
  Rat   330 VNLDRM----YDLVAVVVHCGSGPNRGHYITIVKSHG-FWLLFDDDIVEKIDAQAIEEFYGLTSD 389

  Fly   730 ----PNTPYILFYK 739
                ..:.|||||:
  Rat   390 ISKNSESGYILFYQ 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 111/406 (27%)
Peptidase_C19H 359..739 CDD:239129 112/406 (28%)
Usp46XP_006250950.1 UCH 74..402 CDD:278850 111/407 (27%)
Peptidase_C19G 76..403 CDD:239128 112/406 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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