DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and Usp35

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_006507886.1 Gene:Usp35 / 244144 MGIID:2685339 Length:1072 Species:Mus musculus


Alignment Length:1049 Identity:270/1049 - (25%)
Similarity:417/1049 - (39%) Gaps:345/1049 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GGAGNGIPPNAKPMSANGMANAEENVLPKGMDTGSPAGESLNS-----------NRSGK---RDI 69
            ||||   ||.|:.::.   ......:||.|     ||.:.:.:           .|.|.   ..:
Mouse   154 GGAG---PPGARALAC---VQLGLQLLPDG-----PAADEVFALLRREVLRTVCERPGPAACAQV 207

  Fly    70 KALLAYLQSIDMPEQGHNVMAICERVIVDLARLQIP----RGASCPRLKEDVCQVGAFLAT--RN 128
            ..|||..... :|:..|.:: .|::::..|.|.:.|    .||  ....|...||...||.  |.
Mouse   208 ARLLARHPRC-VPDGAHRLL-FCQQLVRCLGRFRCPAEGEEGA--VEFLEQAQQVSGLLAQLWRA 268

  Fly   129 EKFHQMFYLRVVYELITKSPFEPPPSCAVAIVFQLFDSTQILEAVHSLL--EQNVQDSSIKKTVN 191
            :....:..|:.::.:|:.:..|||.|...::|..|  ..::::.|...|  :.:|.||.:...::
Mouse   269 QPAAILPCLKELFAVISCTEEEPPSSALASVVQHL--PLELMDGVVRNLSNDDSVTDSQMLTAIS 331

  Fly   192 LLCDWITYCTFCSTLNLWVLALLKGLRDQGKMALLDEIAMDNIEKLFHVMIFPALRQKAAPVVFH 256
            .:.||::: .....::.|::||||||....|.::|.|:::..|||:|..:::|.:|..|..|:.:
Mouse   332 RMIDWVSW-PLGKNIDKWIIALLKGLAAVKKFSILIEVSLAKIEKVFSKLLYPIVRGAALSVLKY 395

  Fly   257 MLSTINQTPEVFHKILPRIP-RVLQYVKNQSTTMDEIGLETKKCLQQLVDLTSALMLRFYDQDEL 320
            ||.|...:.|.||.:||.|| .|...||..|.:       ...||:||.:|...::.||....:|
Mouse   396 MLLTFQHSHEAFHLLLPHIPAMVASLVKEDSNS-------GTSCLEQLAELVHCMVFRFPGFPDL 453

  Fly   321 YVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNA----------------RVGLVNLGNTCYM 369
            |....:|::... .||...:.:.:.::|  |..:.:                ::||:|||||||:
Mouse   454 YEPVMEAIKDLH-IPNEDRIKQLLGQDA--WTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYV 515

  Fly   370 NSVLQALAMTSDFSRQIL-LIECNSVLLM-KVQQQIALMHHSLRYELTPSRVLNATRPPSFTPGL 432
            |||||||.|.|||...:| |.|.||..|| |:|...|.:.||.|..::|...|:|:..|.|:||.
Mouse   516 NSVLQALFMASDFRHCVLRLTENNSQPLMTKLQWLFAFLEHSQRPAISPENFLSASWTPWFSPGT 580

  Fly   433 QQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPYNSKDHEL 497
            |||.||:|.||||.|||.|              |||..:                          
Mouse   581 QQDCSEYLKYLLDRLHEEE--------------KTGMRI-------------------------- 605

  Fly   498 SSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPS----TIDKTFAGKLSTTYRCLNC 558
                    |..                |||......|.:.||    :::|.|.||:.|...||:|
Mouse   606 --------CQK----------------LKQSSLPSPQEELPSSNATSVEKMFGGKIVTRICCLHC 646

  Fly   559 GWESRNEDSFRELQLSFP----------------------------------------------- 576
            ...|..|::|.:|.|:||                                               
Mouse   647 LNVSSREEAFTDLSLAFPPPERSRHRRLGSVMLPTEDVRVQELTLAPRAPGAQRQRKRCITGDAP 711

  Fly   577 --------------------------------------------------------------DDK 579
                                                                          |:|
Mouse   712 RTGLDSEGVDTIGTGGRSGQEKVEREQAGKEKEVAEDREEEGTREEEKEEGEEKDKEKEKKEDEK 776

  Fly   580 E-----------------------------DCGAT-NYSVQDLIEYYCSPEKLDGDNQYFCPQCK 614
            |                             .||.. :.||.||:.|:.|||:|..:|:|:|..|.
Mouse   777 EKEAENGKEKEGDSLGPGTHREAATPPREQTCGPEGSRSVLDLVNYFLSPERLTAENRYYCESCA 841

  Fly   615 KLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHY 679
            .|.|||:.:.::|.|:.|||||.:|.:|    .||....|:..|  ||:.:..:..|.......|
Mouse   842 SLQDAEKVVELSQGPRYLILTLLRFSFD----LRTMRRRKILDD--VTIPLLLRLPLAGGQGQAY 900

  Fly   680 DLYAGVVHAGYSMDSGHYFTFAADQA----------------KNWYKFNDNVVTHSKPEEMHNLT 728
            ||.:.|||:|.|.:||||:.:|.:.|                ..||.|||..|::|..|.:.|:|
Mouse   901 DLCSVVVHSGVSSESGHYYCYAREGAARPAPVLGSTERPEPENQWYLFNDTRVSYSSFESVSNVT 965

  Fly   729 S---PNTPYILFYKMCGHSNESNSVTASCSSSMVSGSNDQVVSVPLSPPLKLE-ELPRRLRDYVR 789
            |   .:|.|:|||:                    ....:...:.|.||.::.| .|.:.|.:.:.
Mouse   966 SFFPKDTAYVLFYR--------------------QRPREDPAAEPGSPRVRAEPTLHKDLMEAIS 1010

  Fly   790 KDNHVYNEELKMQRFKRGNSGHGNAFVSR--------HNFDGDGDEDDKAPPPPGGC---GGNGL 843
            |||.:|.:|.:.:...|.      |::|.        ..||.|.|||:.:   ||||   |||| 
Mouse  1011 KDNVLYLQEQEKEARSRA------AYISTLPAPPHWGRGFDEDKDEDEGS---PGGCNPAGGNG- 1065

  Fly   844 GMNINRFVF 852
              :.:|.||
Mouse  1066 --DFHRLVF 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 145/543 (27%)
Peptidase_C19H 359..739 CDD:239129 146/543 (27%)
Usp35XP_006507886.1 Peptidase_C19 505..979 CDD:351799 146/543 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2742
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H35459
Inparanoid 1 1.050 308 1.000 Inparanoid score I2592
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56146
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004017
OrthoInspector 1 1.000 - - otm42866
orthoMCL 1 0.900 - - OOG6_105906
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3301
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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