DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DUBAI and Usp1

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001288343.1 Gene:Usp1 / 230484 MGIID:2385198 Length:784 Species:Mus musculus


Alignment Length:600 Identity:121/600 - (20%)
Similarity:199/600 - (33%) Gaps:241/600 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 LMLRFYDQDELYVATKKAL----------QTYE----------PSPNCVALAKAMHENAQPWGRR 354
            |.|:|:.:.|    ||:||          :|.|          |:.....::....||..|:   
Mouse    23 LSLKFFQKKE----TKRALDFTDSQENEEKTSEYRGSEIDQVVPAAQSSPVSCEKRENLLPF--- 80

  Fly   355 NARVGLVNLGNTCYMNSVLQALAMTSDFSRQI--------------------------------- 386
               |||.|||||||:||:||.|.....|...:                                 
Mouse    81 ---VGLNNLGNTCYLNSILQVLYFCPGFKTGVKHLFNIISRKKEALKDDSNQKDKGSCKEESLAS 142

  Fly   387 --LLIECNSVLLMKVQQQIALMHHSLRY--ELT--PSRVLNATRP--PSFTPGLQQDSSEFLGYL 443
              |:....|:::...|.|.:.:.:..:|  ||.  |.|:||..|.  |.:...||.|:.|.|..:
Mouse   143 YELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGFLQHDAQEVLQCI 207

  Fly   444 L-------DLLHEHEIN-----SSSVTGHSVGPPKTG----------REVDDV------------ 474
            |       .||.:.||.     |..|...|:...:||          |..:||            
Mouse   208 LGNIQETCQLLKKEEIKNLAELSGKVEEQSLQKEETGGITSTEIDSMRNTEDVKEQLPKGNWKRK 272

  Fly   475 ----------------------------------------------------------------- 474
                                                                             
Mouse   273 SDSESSNVKKKVKLSRESQPLEENQRQTRSKRKAIGDTLEAAPKIIPKCVSESESAKPSQKKSKV 337

  Fly   475 -----------PALLSEDILSSGVIPYNSK---------------------DHELSSGSNSDNCN 507
                       |::||: ..|.|.|..|.:                     ||..:.|..|...:
Mouse   338 KINWLKPSTKQPSILSK-FCSLGKITTNQRSKGQPKEKEGDVEEDLEKYGSDHTANGGPESPGSS 401

  Fly   508 HKPTPTPPATPTKATNGLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQ 572
              .||...:.......|.:|.|.::        ::|.|.|:|....|||.|...:...:.|:::.
Mouse   402 --VTPVDSSEAKSGNKGAEQIGFEL--------VEKLFQGQLVLRTRCLECESLTERREDFQDIS 456

  Fly   573 LSFPDDK----EDCGATN-------YSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVT 626
            :...:|:    |:....:       .:::..|..:.|.|::.|:::|||..|....:|||.:...
Mouse   457 VPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFD 521

  Fly   627 QAPKNLILTLKQF-----KYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTV----HYDLY 682
            :.|:.:.:.||.|     ::|......:|:        :..:....|.||:|.||.    .|.|:
Mouse   522 KMPEVITIHLKCFAASGLEFDCYGGGLSKI--------NTPLLTPLKLSLEEWSTKPTNDSYGLF 578

  Fly   683 AGVVHAGYSMDSGHY 697
            |.|:|:|.::.||||
Mouse   579 AVVMHSGITISSGHY 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 106/531 (20%)
Peptidase_C19H 359..739 CDD:239129 105/530 (20%)
Usp1NP_001288343.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..56 5/21 (24%)
Peptidase_C19 82..>253 CDD:271592 43/170 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..342 7/108 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..414 7/53 (13%)
Peptidase_C19O <423..598 CDD:239136 43/186 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 684..725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.