DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DUBAI and USP12

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_872294.2 Gene:USP12 / 219333 HGNCID:20485 Length:370 Species:Homo sapiens


Alignment Length:452 Identity:114/452 - (25%)
Similarity:171/452 - (37%) Gaps:117/452 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 ELYVATKKALQTYEPSPNCVALAKAMHENAQPWGRRNARVGLVNLGNTCYMNSVLQALAMTSDFS 383
            |:.:...|.........|..||.|.:.....|....  ..||||.|||||.|||||||.....|.
Human     2 EILMTVSKFASICTMGANASALEKEIGPEQFPVNEH--YFGLVNFGNTCYCNSVLQALYFCRPFR 64

  Fly   384 RQIL-----------LIECNSVLLMKVQQQIALMHHSLRYE------LTPSRVLNATRPPS--FT 429
            .::|           |:.|           :|.:.||:..:      :.|.:.:...|..:  |.
Human    65 EKVLAYKSQPRKKESLLTC-----------LADLFHSIATQKKKVGVIPPKKFITRLRKENELFD 118

  Fly   430 PGLQQDSSEFLGYLL----DLLHEHEINSSSVTGHSVGPPKTGREVDDVPALLSEDILSSGVIPY 490
            ..:|||:.|||.|||    |:|.|......                            .:|.:| 
Human   119 NYMQQDAHEFLNYLLNTIADILQEERKQEK----------------------------QNGRLP- 154

  Fly   491 NSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRC 555
                     ..|.||.|:..||                        .|:.:.:.|.|.|:...||
Human   155 ---------NGNIDNENNNSTP------------------------DPTWVHEIFQGTLTNETRC 186

  Fly   556 LNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAE 620
            |.|...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|..:.:|:|.:|:...:|.
Human   187 LTCETISSKDEDFLDLSV----DVEQ----NTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243

  Fly   621 RHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSAKDSLQEMSTVHYDLYAGV 685
            :.:.|.:.|..|.|.||:|||..:.|..|||.::|.....:.:..::.|:......  |||.|.|
Human   244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRM--YDLVAVV 306

  Fly   686 VHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNLTS-----PNTPYILFYK 739
            ||.|...:.|||....... ..|..|:|::|..   ...||.:.|||     ..:.|||||:
Human   307 VHCGSGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 105/410 (26%)
Peptidase_C19H 359..739 CDD:239129 106/410 (26%)
USP12NP_872294.2 Peptidase_C19G 40..367 CDD:239128 106/410 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..169 8/85 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.