DRSC/TRiP Functional Genomics Resources

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Protein Alignment DUBAI and usp12

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_002941584.2 Gene:usp12 / 100494517 XenbaseID:XB-GENE-1009317 Length:370 Species:Xenopus tropicalis


Alignment Length:412 Identity:108/412 - (26%)
Similarity:161/412 - (39%) Gaps:115/412 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GLVNLGNTCYMNSVLQALAMTSDFSRQIL-----------LIECNSVLLMKVQQQIALMHHSLRY 412
            ||||.|||||.|||||||.....|..::|           |:.|           :|.:.||:..
 Frog    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTC-----------LADLFHSIAT 93

  Fly   413 E------LTPSRVLNATRPPS--FTPGLQQDSSEFLGYLL----DLLHEHEINSSSVTGHSVGPP 465
            :      :.|.:.:...|..:  |...:|||:.|||.|||    |:|.|......          
 Frog    94 QKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEK---------- 148

  Fly   466 KTGREVDDVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQ 530
                              .:|.||          ..|.||.|:..||                  
 Frog   149 ------------------QNGRIP----------NGNIDNENNNSTP------------------ 167

  Fly   531 QVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEY 595
                  .|:.:.:.|.|.|:...|||.|...|..::.|.:|.:    |.|.    |.|:...:..
 Frog   168 ------DPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV----DVEQ----NTSITHCLRG 218

  Fly   596 YCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDES 660
            :.:.|.|..:.:|:|.:|:...:|.:.:.|.:.|..|.|.||:|||..:.|..|||.::|.....
 Frog   219 FSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLE 283

  Fly   661 VTVKMSAKDSLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPE 722
            :.:..::.|:......  |||.|.|||.|...:.|||....... ..|..|:|::|..   ...|
 Frog   284 LRLFNTSGDATNPDRM--YDLVAVVVHCGSGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIE 345

  Fly   723 EMHNLTS-----PNTPYILFYK 739
            |.:.|||     ..:.|||||:
 Frog   346 EFYGLTSDISKNSESGYILFYQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 106/409 (26%)
Peptidase_C19H 359..739 CDD:239129 107/410 (26%)
usp12XP_002941584.2 Peptidase_C19G 40..367 CDD:239128 107/410 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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