DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DUBAI and usp46

DIOPT Version :9

Sequence 1:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001231910.1 Gene:usp46 / 100148916 ZFINID:ZDB-GENE-070705-213 Length:370 Species:Danio rerio


Alignment Length:407 Identity:113/407 - (27%)
Similarity:171/407 - (42%) Gaps:101/407 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GLVNLGNTCYMNSVLQALAMTSDFSRQILLIECNSVLLMKVQQQ--------IALMHHSLRYE-- 413
            ||||.|||||.|||||||.....|.        .:||..||||:        :|.:.||:..:  
Zfish    36 GLVNFGNTCYCNSVLQALYFCRPFR--------ENVLAYKVQQKKKENLLTCLADLFHSIATQKK 92

  Fly   414 ----LTPSRVLNATRPPS--FTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVD 472
                :.|.:.::..|..:  |...:|||:.|||.|||:.:                         
Zfish    93 KVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTV------------------------- 132

  Fly   473 DVPALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKPTPTPPATPTKATNGLKQQGQQVDQAKP 537
                   .|||.      ..:..|..:|...:|.....|.|.|            :..::|    
Zfish   133 -------ADILQ------EERKQEKQNGRLKNNGTAIATDTEP------------EQNKID---- 168

  Fly   538 PSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQDLIEYYCSPEKL 602
            |:.:.:.|.|.|:...|||||...|..::.|.:|.:    |.|.    |.|:...:..:.:.|.|
Zfish   169 PTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSV----DVEQ----NTSITHCLRDFSNTETL 225

  Fly   603 DGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKMSA 667
            ..:.:|:|..|....:|::.:.|.:.|..|.|.||:|||.::.|..|||.::|.....:.:..::
Zfish   226 CSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTS 290

  Fly   668 KD--SLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH---SKPEEMHNL 727
            .|  :|..|    |||.|.|||.|...:.|||.|...... .|..|:|::|..   ...||.:.|
Zfish   291 GDAVNLDRM----YDLVAVVVHCGSGPNRGHYITIVKSHG-FWLLFDDDIVEKIDAQAIEEFYGL 350

  Fly   728 TS-----PNTPYILFYK 739
            ||     ..:.|||||:
Zfish   351 TSDISKNSESGYILFYQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DUBAINP_610784.1 UCH 358..738 CDD:278850 111/404 (27%)
Peptidase_C19H 359..739 CDD:239129 112/405 (28%)
usp46NP_001231910.1 UCH 34..366 CDD:278850 111/404 (27%)
Peptidase_C19G 36..367 CDD:239128 112/405 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.