DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8520 and AFG1

DIOPT Version :9

Sequence 1:NP_001188911.1 Gene:CG8520 / 36357 FlyBaseID:FBgn0033734 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_010862.1 Gene:AFG1 / 856658 SGDID:S000000778 Length:509 Species:Saccharomyces cerevisiae


Alignment Length:483 Identity:159/483 - (32%)
Similarity:235/483 - (48%) Gaps:75/483 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LSPLKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSY--------RAGGGGGGFFSSIF 86
            |:||:||::.|..|:|..|..|...:..|..||..:..|.|..        :.||...| ..|:|
Yeast    34 LTPLQEYDRLVKLGKLRDDTYQRGIISSLGDLYDSLVKYVPPVVKTPNAVDQVGGWLNG-LKSVF 97

  Fly    87 GR-KSSTEDDDQDDPNAGSHAPQGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRVHFTSFMNTVH 150
            .| |........|....|:..|:|:||||.||.|||.|||||:........|:|:||..||..||
Yeast    98 SRGKPKNIGAYVDVSKIGNSIPRGVYLYGDVGCGKTMLMDLFYTTIPNHLTKKRIHFHQFMQYVH 162

  Fly   151 TRIHEAKQRQGPVDRAFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTDIADAMVLKRLFTHL 215
            .|.||..:.|..  :.....|....|....:|..||:.|.::|||||||||:||||:|:||.|.|
Yeast   163 KRSHEIVREQNL--KELGDAKGKEIDTVPFLAAEIANNSHVLCFDEFQVTDVADAMILRRLMTAL 225

  Fly   216 FR--HGIVVVATSNRHPEDLYKNGLQRTNFLPFIALLQRRCKVSQLDS-IDYRRIAQ-------- 269
            ..  :|:|:.|||||||::||.||:||.:|:|.|.|::.|.||..|:| .|||:|.:        
Yeast   226 LSDDYGVVLFATSNRHPDELYINGVQRQSFIPCIELIKHRTKVIFLNSPTDYRKIPRPVSSVYYF 290

  Fly   270 SGDT---------------------NYFVK-GQTDADGSMNRMFKILCAEENDIIRPRTLTHFGR 312
            ..||                     |||.: ..||.....:.:.|        ......||.:||
Yeast   291 PSDTSIKYASKECKTRRETHIKEWYNYFAQASHTDDSTDSHTVHK--------TFYDYPLTIWGR 347

  Fly   313 DLTFNR-TCGQVLDSTFSELCDRPLAGSDFLQISQFFHTVLIRDVPQLTLDVKAQMRRFITLIDT 376
            :....: |..:|...||.:||..|||..|:|.:::.|...::.|:|.|::.|:.::|||||.:|.
Yeast   348 EFKVPKCTPPRVAQFTFKQLCGEPLAAGDYLTLAKNFEAFIVTDIPYLSIYVRDEVRRFITFLDA 412

  Fly   377 LYNNRVRVVISSDVALENLFSFTGGSKTLSDSE------------RTLMDDLNIKE-------SK 422
            :|::..::..:......:|  |....:.|:|.|            ..::|::..|.       .|
Yeast   413 VYDSGGKLATTGAADFSSL--FVEPEQILNDFELRPTTKEPDSVDTGMVDEMVEKHGFSKEIAKK 475

  Fly   423 ASFFTGEEELFAFDRTLSRLYEMQKREY 450
            :..|..:||.|||.|.||||.:|...::
Yeast   476 SQMFALDEERFAFARALSRLSQMSSTDW 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8520NP_001188911.1 YhcM 22..450 CDD:224402 159/481 (33%)
P-loop_NTPase 31..450 CDD:304359 158/480 (33%)
AFG1NP_010862.1 YhcM 35..509 CDD:224402 158/482 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346706
Domainoid 1 1.000 189 1.000 Domainoid score I646
eggNOG 1 0.900 - - E1_COG1485
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5782
Inparanoid 1 1.050 217 1.000 Inparanoid score I780
Isobase 1 0.950 - 0 Normalized mean entropy S1327
OMA 1 1.010 - - QHG54198
OrthoFinder 1 1.000 - - FOG0003120
OrthoInspector 1 1.000 - - oto98962
orthoMCL 1 0.900 - - OOG6_101377
Panther 1 1.100 - - LDO PTHR12169
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4204
SonicParanoid 1 1.000 - - X2090
TreeFam 1 0.960 - -
1514.830

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