DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8520 and AT4G28070

DIOPT Version :9

Sequence 1:NP_001188911.1 Gene:CG8520 / 36357 FlyBaseID:FBgn0033734 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001031737.1 Gene:AT4G28070 / 828922 AraportID:AT4G28070 Length:473 Species:Arabidopsis thaliana


Alignment Length:457 Identity:163/457 - (35%)
Similarity:244/457 - (53%) Gaps:70/457 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HMSG----LSPLKEYEKRVSSGQLMT-DNRQLQTMKELDALYH---------KIQGYKPSYRAGG 76
            |.:|    ..||.|||:|:.:|:|:. |..||.|::||..||.         ::..|..|  |..
plant    52 HSNGDGKIAGPLVEYERRIVAGELLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSAS--AKS 114

  Fly    77 GGGGFFSSIFGRKSSTEDDDQDDPNAGSHAP-QGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRV 140
            ....:|.:.|...||.             :| :||||||.||.|||.||||||.......|.||:
plant   115 TRSNWFWNKFVSHSSV-------------SPVKGLYLYGGVGTGKTMLMDLFFHQLPASWRTQRI 166

  Fly   141 HFTSFMNTVHTRIHEAKQRQGPVDRAFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTDIADA 205
            ||.:||.:||:|:.:.|..:               ||.:.|...||.|:.|:|.|||.|.|:|||
plant   167 HFHNFMLSVHSRLQKHKGLE---------------DPLEVVGLEIADEAILLCLDEFMVNDVADA 216

  Fly   206 MVLKRLFTHLFRHGIVVVATSNRHPEDLYKNGLQRTNFLPFIALLQRRCKVSQL-DSIDYRRIAQ 269
            ::|.|||.|||.:||::||||||.|::||:.||||..|||||:.|:.||.|.:: .|:|||::..
plant   217 LILNRLFRHLFNNGIILVATSNRAPDNLYEGGLQRDLFLPFISTLKERCVVREIGSSVDYRKLTS 281

  Fly   270 SGDTNYFVKGQTDADGSMNRMFKILCAEENDIIRPRTL-THFGRDLTFNRTCGQVLDSTFSELCD 333
            :.:..||: |: |..|.:.:.|::|..::.  ..|:.: ...||.|.............|.||||
plant   282 AEEGFYFI-GK-DISGLLKQKFQLLVGDQP--AGPQVVEVVMGRKLQVPLAADGCAYFLFEELCD 342

  Fly   334 RPLAGSDFLQISQFFHTVLIRDVPQLTLDVKAQMRRFITLIDTLYNNRVRVVISSDVA----LEN 394
            |||..:|:|.:.:.|||:.:..||...|..:....||:||:|.:|.|:.|::.:::.:    ||.
plant   343 RPLGAADYLGLFKKFHTLALEGVPFFGLHNRTAAYRFVTLVDVMYENKARLLCTAEGSPLELLER 407

  Fly   395 LFSFTGGS----KTLSDSERTLMDDLNIKESKASFFTGEEEL-FAFDRTLSRLYEMQKREYWEQW 454
            :.:.:...    :|.|.|.::...||.:          :.|| ||.|||:|||.||..:||.||.
plant   408 IVTISDAQQIAPRTSSRSRKSDDPDLCV----------DNELGFAKDRTISRLTEMNSKEYLEQH 462

  Fly   455 AK 456
            ::
plant   463 SR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8520NP_001188911.1 YhcM 22..450 CDD:224402 159/449 (35%)
P-loop_NTPase 31..450 CDD:304359 157/440 (36%)
AT4G28070NP_001031737.1 YhcM 62..464 CDD:224402 161/445 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 221 1.000 Domainoid score I714
eggNOG 1 0.900 - - E1_COG1485
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5782
Inparanoid 1 1.050 239 1.000 Inparanoid score I1089
OMA 1 1.010 - - QHG54198
OrthoDB 1 1.010 - - D702840at2759
OrthoFinder 1 1.000 - - FOG0003120
OrthoInspector 1 1.000 - - otm3532
orthoMCL 1 0.900 - - OOG6_101377
Panther 1 1.100 - - LDO PTHR12169
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2090
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.930

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