DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8520 and AT2G25530

DIOPT Version :9

Sequence 1:NP_001188911.1 Gene:CG8520 / 36357 FlyBaseID:FBgn0033734 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_180123.1 Gene:AT2G25530 / 817091 AraportID:AT2G25530 Length:655 Species:Arabidopsis thaliana


Alignment Length:489 Identity:143/489 - (29%)
Similarity:229/489 - (46%) Gaps:90/489 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSYRAGGGGGGFFSSIFGRKSSTEDDDQ 97
            ::|.||:...|...:.|:|.|.:.....|..:....:|       |.|.:.|...|:...     
plant   175 VEEAEKKEDDGMWASVNKQGQKLLGRWVLGRRQMNVEP-------GVGKWVSYLNRERKL----- 227

  Fly    98 DDPNAGSH-----APQGLYLYGSVGVGKTTLMDLFFDCCTQIHR-KQRVHFTSFMNTVHTRIHEA 156
             |...||.     ||:|||:||:||.|||.|||:|:.....|.| :||.||...|..::.::|:.
plant   228 -DSIVGSRPAVPPAPKGLYIYGNVGCGKTMLMDMFYGATDGIIRHRQRFHFHEAMLKINEQMHKY 291

  Fly   157 KQRQGPVDRAFNSEKPAPFDPTKPVADLIASE---SWL--------------------------- 191
            .:..|       :|||..:..:..:.:|...|   .||                           
plant   292 WKENG-------AEKPMQYSISSWIMNLPVDEKVKEWLAGEEFYKQQLQMKHILPAVADKFLVDQ 349

  Fly   192 ---------ICFDEFQVTDIADAMVLKRLFTHLFRHGIVVVATSNRHPEDLYKNGLQRTNFLPFI 247
                     :||||.|..|:...:.|..:.:.|...|.|:||||||.|.:|.::|:|:..|..||
plant   350 QSSKKGASILCFDEIQTVDVFAIVALSGIMSRLLTTGTVLVATSNRAPRELNQDGMQKEIFDKFI 414

  Fly   248 ALLQRRCKVSQLDS-IDYRRIA--QSGDTNYFVKGQTDAD-GSMNRMFKILCAEENDIIRPRTL- 307
            :.|::.|::..:.| :||||:|  .|.:..:::....||. ....:|::.:..:....|...|| 
plant   415 SKLEKHCEIISIGSEVDYRRVAAKNSAENVHYLWPLNDAVLEEFEKMWRQVTDQYGGEITSATLP 479

  Fly   308 THFGRDLTFNRTCGQVLDSTFSELCDRPLAGSDFLQISQFFHTVLIRDVPQLTLDVKAQMRRFIT 372
            ..|||.:....:|..|...||..||.||:..:|::.:::.:||:.|.|:|.::::::.:.|||||
plant   480 VMFGRTVEVPESCSGVARFTFEYLCGRPVGAADYIAVAKNYHTIFISDIPAMSMEIRDKARRFIT 544

  Fly   373 LIDTLYNNRVRVVISSDVALENLFSFTGGSKTLSDSE----RTLMDDLNIK-------------- 419
            |:|.|||:...:|.|::.|::.||..| ...||.|.|    .|..:|..::              
plant   545 LVDELYNHHCCLVSSAETAIDELFQGT-AEGTLFDLESFQFETETEDSRLRRDVLAEGSISAAGS 608

  Fly   420 -ESKASFFTGEEELFAFDRTLSRLYEMQKREYWE 452
             .|..|..:||||:|||.|..|||.|||...|.|
plant   609 PSSIVSMLSGEEEMFAFARAASRLIEMQTPLYLE 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8520NP_001188911.1 YhcM 22..450 CDD:224402 141/485 (29%)
P-loop_NTPase 31..450 CDD:304359 141/485 (29%)
AT2G25530NP_180123.1 YhcM 112..642 CDD:224402 142/487 (29%)
P-loop_NTPase 223..642 CDD:304359 130/432 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1485
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D702840at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101377
Panther 1 1.100 - - O PTHR12169
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

Return to query results.
Submit another query.