DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8520 and Afg1l

DIOPT Version :10

Sequence 1:NP_610780.1 Gene:CG8520 / 36357 FlyBaseID:FBgn0033734 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_063135545.1 Gene:Afg1l / 502479 RGDID:1561501 Length:546 Species:Rattus norvegicus


Alignment Length:229 Identity:102/229 - (44%)
Similarity:139/229 - (60%) Gaps:29/229 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CHMSGLSPLKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSYRAGGGGGGFFSSIFGRK 89
            ||    .||..|:..:.:.:|..|..|.:.::.|..|...::||...      .||.||.:|.| 
  Rat    72 CH----GPLAHYDFLIKAQELKNDEHQRRVVQCLQKLQEDLKGYNIE------EGGLFSKLFSR- 125

  Fly    90 SSTEDDDQDDPNAGSHAPQGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRVHFTSFMNTVHTRIH 154
                          :..|:|||:||.||.|||.:||:|:: ..::..|:||||..||..||.|||
  Rat   126 --------------NKPPKGLYVYGDVGTGKTMVMDMFYE-YVEVKSKRRVHFHGFMLDVHKRIH 175

  Fly   155 EAKQRQGPVDRAFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTDIADAMVLKRLFTHLFRHG 219
            ..||........|.::.   :||..|:|:.|:.|:.|:||||||||||||||:||:||.:||::|
  Rat   176 RLKQSLPKRKVGFMAKS---YDPIAPIAEEISQEASLLCFDEFQVTDIADAMILKQLFENLFKNG 237

  Fly   220 IVVVATSNRHPEDLYKNGLQRTNFLPFIALLQRR 253
            :||||||||.|||||||||||.||:||||:|:.|
  Rat   238 VVVVATSNRPPEDLYKNGLQRANFVPFIAVLKAR 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8520NP_610780.1 ZapE 28..456 CDD:441094 100/226 (44%)
Afg1lXP_063135545.1 None

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