DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8520 and afg1l

DIOPT Version :9

Sequence 1:NP_001188911.1 Gene:CG8520 / 36357 FlyBaseID:FBgn0033734 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_002937207.3 Gene:afg1l / 100490998 XenbaseID:XB-GENE-954906 Length:482 Species:Xenopus tropicalis


Alignment Length:445 Identity:197/445 - (44%)
Similarity:273/445 - (61%) Gaps:44/445 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 APACHMSG--------LSPLKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSYRAGGGG 78
            ||.|.::.        ..||..|:..|....|..|:.|.:.|:.|..|:..::||:...:     
 Frog    59 APICDINTQAKALQKCTGPLHHYDYLVKEASLRKDDHQRRVMQHLQTLHENLKGYRKDSK----- 118

  Fly    79 GGFFSSIFGRKSSTEDDDQDDPNAGSHAPQGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRVHFT 143
             |..|.:|.::.:               .:|||::|.||.|||.:||:||| ..::.:|:||||.
 Frog   119 -GVLSKLFAKRKT---------------QKGLYVFGDVGTGKTMVMDMFFD-HVEVEQKKRVHFH 166

  Fly   144 SFMNTVHTRIHEAKQRQGPVDRAFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTDIADAMVL 208
            .||..||.|||..| |..|..:|....|  .:||..|:|:.|:.|:.|:||||||||||||||:|
 Frog   167 GFMLDVHARIHRLK-RNLPKRKAGFMAK--AYDPIAPIAEEISDEACLLCFDEFQVTDIADAMIL 228

  Fly   209 KRLFTHLFRHGIVVVATSNRHPEDLYKNGLQRTNFLPFIALLQRRCKVSQLDS-IDYR-RIAQSG 271
            |:||.:||.:|:||||||||.|||||||||||.||:||||:|:..|...|||| |||| |:..:.
 Frog   229 KQLFENLFLNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKNYCSTVQLDSGIDYRKRVLSAA 293

  Fly   272 DTNYFVKGQTDADGSMNRMFKILCAEENDIIRPRTLTHFGRDLTFNRTCGQVLDSTFSELCDRPL 336
            |..||:..:.|.:..|:::|..|..::||:.|||.|...||:|..::.||.:.|.||.|||||||
 Frog   294 DKVYFLTSEADVEAVMDKLFDELAQKQNDVTRPRILKLQGRELKLHKACGSIADCTFEELCDRPL 358

  Fly   337 AGSDFLQISQFFHTVLIRDVPQLTLDVKAQMRRFITLIDTLYNNRVRVVISSDVALENLFSFTGG 401
            ..||:|::.:.|.||.||.:|.|.:..::|.||||||||..|:::||||.|:|..|::||.    
 Frog   359 GASDYLEMCKNFDTVFIRRIPHLDMTQRSQARRFITLIDAFYDHKVRVVCSADRPLQSLFL---- 419

  Fly   402 SKT--LSDSERTLMDDLNIKESKA---SFFTGEEELFAFDRTLSRLYEMQKREYW 451
            .|.  :.:..:.|:|||.:.|..:   |.||||||:|||.||||||.|||..:||
 Frog   420 QKVPKVEEESKILLDDLGLNEELSGGLSIFTGEEEVFAFQRTLSRLTEMQTEQYW 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8520NP_001188911.1 YhcM 22..450 CDD:224402 195/442 (44%)
P-loop_NTPase 31..450 CDD:304359 192/425 (45%)
afg1lXP_002937207.3 YhcM 77..473 CDD:224402 192/424 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 312 1.000 Domainoid score I1294
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5782
Inparanoid 1 1.050 353 1.000 Inparanoid score I2208
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263573at33208
OrthoFinder 1 1.000 - - FOG0003120
OrthoInspector 1 1.000 - - oto102258
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2090
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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