DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and FAA2

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_010931.3 Gene:FAA2 / 856734 SGDID:S000000817 Length:744 Species:Saccharomyces cerevisiae


Alignment Length:665 Identity:143/665 - (21%)
Similarity:237/665 - (35%) Gaps:227/665 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DNIWSGAKRNSIYNYDTSVGKIIFNNMKNWPKNVC-QICDVDGVTVTFEQGLTWS---------- 65
            :|:.|...:|....||    ..:| :.:.||:..| ....:|..|.|:|:...:.          
Yeast    82 ENLVSCVDKNLRTAYD----HFMF-SARRWPQRDCLGSRPIDKATGTWEETFRFESYSTVSKRCH 141

  Fly    66 ------IRIAQYLKKRGLNHKD-VIGIAAKNSTYVMPLGVAC----LMNGTPFHSVNPVLDDATL 119
                  :.:....:||.|...| |:.|.:.|:...:...:||    |.|...:.::.|    .|.
Yeast   142 NIGSGILSLVNTKRKRPLEANDFVVAILSHNNPEWILTDLACQAYSLTNTALYETLGP----NTS 202

  Fly   120 THVFSITK-PTLIFCDGQEYDKVHKATVGWHPEILTLTDHVEGVQGI---------------ETL 168
            .::.::|: |.|||.....|            .:|.:...::.|..:               |:|
Yeast   203 EYILNLTEAPILIFAKSNMY------------HVLKMVPDMKFVNTLVCMDELTHDELRMLNESL 255

  Fly   169 LD---PTTTEKI--YQPEVLKEGG------------DQTVAILCSSGTTGLPKAVCISNSILIQD 216
            |.   .:..|||  :..|.:::.|            |....|..:||||||||.|.:|:..:   
Yeast   256 LPVKCNSLNEKITFFSLEQVEQVGCFNKIPAIPPTPDSLYTISFTSGTTGLPKGVEMSHRNI--- 317

  Fly   217 SMLITSQSVIYVGSCLDWITGLWAFVFSTVFGCTRIISNK--------AFTP------------E 261
                              .:|: ||.|||.    ||..:|        .|.|            :
Yeast   318 ------------------ASGI-AFAFSTF----RIPPDKRNQQLYDMCFLPLAHIFERMVIAYD 359

  Fly   262 YFVG-------------LVKKYKI--NYAV-LPPRHL------------------SALITCPDAK 292
            ..:|             ||:..||  .||| |.||.|                  :...|..|:|
Yeast   360 LAIGFGIGFLHKPDPTVLVEDLKILKPYAVALVPRILTRFEAGIKNALDKSTVQRNVANTILDSK 424

  Fly   293 ---------PD---------------------ALAPITHLNYGGGSISLATLQRSQELCKTAM-- 325
                     ||                     .|:..:.:..|...||..||.    ..::|:  
Yeast   425 SARFTARGGPDKSIMNFLVYHRVLIDKIRDSLGLSNNSFIITGSAPISKDTLL----FLRSALDI 485

  Fly   326 -FNSGYGMTEVGAITINIGI-------SNVSSAGRPVPGI----KIRIVDEDGKSLGYNQVGEIY 378
             ...|||:||..|     |:       .:|.|.|  ..||    :::.|.|.|.....:..||:.
Yeast   486 GIRQGYGLTETFA-----GVCLSEPFEKDVGSCG--AIGISAECRLKSVPEMGYHADKDLKGELQ 543

  Fly   379 VHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKY-NGLHYWPTEIE 442
            :...|.:..|:.||.||.:..|.:|||.|||:.:.|.:..:.::||.|...|. :|.:..|.:||
Yeast   544 IRGPQVFERYFKNPNETSKAVDQDGWFSTGDVAFIDGKGRISVIDRVKNFFKLAHGEYIAPEKIE 608

  Fly   443 TVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAKEIVEHVAKRLPATQKQLRAGVQFT 507
            .:.  ||....:..:.::    ||.....:|...|..:.|.:.:      |.|...:::...:  
Yeast   609 NIY--LSSCPYITQIFVF----GDPLKTFLVGIVGVDVDAAQPI------LAAKHPEVKTWTK-- 659

  Fly   508 DKLPANVN-GKTMRK 521
            :.|..|:| .|.:||
Yeast   660 EVLVENLNRNKKLRK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 141/657 (21%)
AFD_class_I 46..519 CDD:302604 133/627 (21%)
FAA2NP_010931.3 LC-FACS_euk 126..734 CDD:341250 130/616 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344305
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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