DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and 4CL1

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_175579.1 Gene:4CL1 / 841593 AraportID:AT1G51680 Length:561 Species:Arabidopsis thaliana


Alignment Length:551 Identity:150/551 - (27%)
Similarity:241/551 - (43%) Gaps:49/551 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NEKDNIWSGAKRNSIY--NYDTSVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQY 71
            |...::...:|...||  |: .|:...||.|:..:....|.|....|...|:......|.:||..
plant    18 NNNSDVIFRSKLPDIYIPNH-LSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAAN 81

  Fly    72 LKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVLDDATLTHVFSITKPTLIFCDGQ 136
            ..|.|:|..||:.:...|....:...:|....|....:.||....|.:......:...||..:.:
plant    82 FHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEAR 146

  Fly   137 EYDKVHKATVGWHPEILTLTDHVEGVQGIE-----TLLDPTTTEKIYQPEVLKEGGDQTVAILCS 196
            ..||: |........::...|..|.|...|     |.|..:|||.....:.::...|..||:..|
plant   147 YVDKI-KPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYS 210

  Fly   197 SGTTGLPKAVCISNSILI----------QDSMLITSQSVIYVGSCLDWITGLWAFVFSTVFGC-- 249
            ||||||||.|.:::..|:          ..::...|..||.   |:  :.....:..:::..|  
plant   211 SGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVIL---CV--LPMFHIYALNSIMLCGL 270

  Fly   250 ---TRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGGGSISL 311
               ..|:....|.....:.|:::.|:..|.:.|..:.|:....:.:...|:.|..:..|.     
plant   271 RVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGA----- 330

  Fly   312 ATLQRSQELCKTAMF-----NSGYGMTEVG-AITINIGIS------NVSSAGRPVPGIKIRIVDE 364
            |.|.:..|....|.|     ..||||||.| .:.:::|.:      ...:.|..|...:::|||.
plant   331 APLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDP 395

  Fly   365 D-GKSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEI 428
            | |.||..||.|||.:...|...||..||..|....|.:||.||||:|..|:.:.|:||||.||:
plant   396 DTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKEL 460

  Fly   429 LKYNGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAKEIVEHVAKRL 493
            :||.|....|.|:|.::.....:.||.||.:.:|..|:...|.|||||.:.:|..::.:.|:|::
plant   461 IKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQV 525

  Fly   494 PATQKQLRAGVQFTDKLPANVNGKTMRKTAR 524
             ...|::.. |.||:.:|...:||.:||..|
plant   526 -VFYKRINK-VFFTESIPKAPSGKILRKDLR 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 148/540 (27%)
AFD_class_I 46..519 CDD:302604 138/505 (27%)
4CL1NP_175579.1 PLN02246 16..560 CDD:215137 150/551 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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