DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8834 and AT1G20500

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_173474.5 Gene:AT1G20500 / 838638 AraportID:AT1G20500 Length:550 Species:Arabidopsis thaliana


Alignment Length:497 Identity:142/497 - (28%)
Similarity:230/497 - (46%) Gaps:45/497 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GVTVTFEQGLTWSI--RIAQYL-KKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVL 114
            |..:||..  .|..  |:|..| .:.|:...||:.|.:.||.::..:.::.:..|..|.:.|.:.
plant    61 GQCLTFSD--LWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLN 123

  Fly   115 DDATLTHVFSITKPTLIFCDGQEYDKVHKA--TVGWHPEI---LTLTDHVEGVQGIETLLDPT-- 172
            ....::...:.:.|||:|...|...|:..|  .|....|:   ||....|.|:.......:|:  
plant   124 TSGEISKQIADSNPTLVFTTRQLAPKLPVAISVVLTDDEVYQELTSAIRVVGILSEMVKKEPSGQ 188

  Fly   173 -TTEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISNSIL-------IQDSMLITSQSVIYVG 229
             ..:::.|        |.|..:|.||||||..|.|..|:..|       |.|::   .:..|::.
plant   189 RVRDRVNQ--------DDTAMMLYSSGTTGPSKGVISSHRNLTAHVARFISDNL---KRDDIFIC 242

  Fly   230 SCLDWIT-GLWAFVFSTV-FGCTRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPD-- 290
            :...:.| ||..|...|| .|.|.:|..: |.....:..|:|::.....|.|..|.|:|...|  
plant   243 TVPMFHTYGLLTFAMGTVALGSTVVILRR-FQLHDMMDAVEKHRATALALAPPVLVAMINDADLI 306

  Fly   291 -AKPDALAPITHLNYGGGSISLATLQRSQELCKTAMFNSGYGMTEV---GAITINIGIS-NVSSA 350
             ||.| |:.:..:..||..:|....:...|...|.....||.:||.   ||.|.:...| ...:|
plant   307 KAKYD-LSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTESNGGGAFTNSAEESRRYGTA 370

  Fly   351 GRPVPGIKIRIVDED-GKSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFD 414
            |.....::.||||.: |:.:|.||.||:::.......||:.|...|....:.|||..||||.|.|
plant   371 GTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYID 435

  Fly   415 EQNFLYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGAT 479
            |..||::|||.||::||.|....|.|:|.::.....:.|..|:...|:..|....|.||:...:.
plant   436 EDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESN 500

  Fly   480 ISAKEIVEHVAKRLPATQKQLRAGVQFTDKLPANVNGKTMRK 521
            :|.|::::.::|:: |..|::|. |.|.:.:|...:|||:||
plant   501 LSEKQVIDFISKQV-APYKKIRK-VSFINSIPKTASGKTLRK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 142/497 (29%)
AFD_class_I 46..519 CDD:302604 139/493 (28%)
AT1G20500NP_173474.5 PLN02574 16..542 CDD:215312 142/497 (29%)
4CL 32..542 CDD:213272 142/497 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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