DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and 4CL2

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_188761.1 Gene:4CL2 / 821678 AraportID:AT3G21240 Length:556 Species:Arabidopsis thaliana


Alignment Length:537 Identity:142/537 - (26%)
Similarity:242/537 - (45%) Gaps:77/537 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQYLKKRGLNHKDVIGIAAKNSTYVMPLGV 98
            ||.|:..:....|.|....|...|:......|.::|..|...|:...||:.|...||..|:...:
plant    42 IFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVKQHDVVMILLPNSPEVVLTFL 106

  Fly    99 ACLMNGTPFHSVNPVLDDATLTHVFSITKPTLIFCDGQEYDKVHKATVGWHPEILTLTDHVEGV- 162
            |....|....|.||....|.::.....:...||....:..||:....   :..:|.:|...:.: 
plant   107 AASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDKIKNLQ---NDGVLIVTTDSDAIP 168

  Fly   163 ----------QGIETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISNSILI--- 214
                      |..|..:| :..||| .||       ..||:..|||||||||.|.:::..|:   
plant   169 ENCLRFSELTQSEEPRVD-SIPEKI-SPE-------DVVALPFSSGTTGLPKGVMLTHKGLVTSV 224

  Fly   215 --------------QDSMLITSQSVIYVGSCLDWITGLWAFVFSTVFGCT-RIISNKAFTPEYFV 264
                          :|.:::....:.::            :..:::..|: |:.:.....|::.:
plant   225 AQQVDGENPNLYFNRDDVILCVLPMFHI------------YALNSIMLCSLRVGATILIMPKFEI 277

  Fly   265 GL----VKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGGGSISLATLQRSQELCKTAM 325
            .|    :::.|:..|::.|..:.|:...|:.:...|:.:..:..|.     |.|.:..|...:|.
plant   278 TLLLEQIQRCKVTVAMVVPPIVLAIAKSPETEKYDLSSVRMVKSGA-----APLGKELEDAISAK 337

  Fly   326 F-----NSGYGMTEVG-AITINIGIS------NVSSAGRPVPGIKIRIVDED-GKSLGYNQVGEI 377
            |     ..||||||.| .:.:::|.:      ...:.|..|...:::|:|.| |.||..|:.|||
plant   338 FPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKILDPDTGDSLPRNKPGEI 402

  Fly   378 YVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKYNGLHYWPTEIE 442
            .:...|...||..:|:.|....|.:||.||||:|:.|:.:.|:||||.||::||.|....|.|:|
plant   403 CIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELE 467

  Fly   443 TVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAKEIVEHVAKRLPATQKQLRAGVQFT 507
            :::....::.||.||.:.:|..|:...|.||:||.:.||..||.:.|:|:: ...|::.. |.||
plant   468 SLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQV-VFYKRINK-VFFT 530

  Fly   508 DKLPANVNGKTMRKTAR 524
            |.:|...:||.:||..|
plant   531 DSIPKAPSGKILRKDLR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 142/537 (26%)
AFD_class_I 46..519 CDD:302604 136/518 (26%)
4CL2NP_188761.1 PLN02246 14..553 CDD:215137 142/537 (26%)
4CL 32..546 CDD:213272 141/534 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.