DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and LOC568883

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_003199367.1 Gene:LOC568883 / 568883 -ID:- Length:640 Species:Danio rerio


Alignment Length:573 Identity:116/573 - (20%)
Similarity:202/573 - (35%) Gaps:196/573 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VTFE-QGLTW------SIRIAQYLKK-RGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNP 112
            :.|| |.||:      |.::|..||. |||.|.|::.:...|....:.:.:.....|.....:|.
Zfish    93 IVFEDQTLTYRDVDVRSNKLANVLKSHRGLKHGDIVALLMNNEADFICVWLGLCKLGCEVAFLNF 157

  Fly   113 VLDDATLTH----------------VFSITKPTLIFCDGQEYDKVHKATVG---W-------HPE 151
            .:...:|.|                |.|:.:..|:..||           |   |       |..
Zfish   158 NIKSQSLQHCLDRCGAKTLVIGSDLVKSLDEVLLMLTDG-----------GIEIWVASESSSHQN 211

  Fly   152 ILTLTDHVEGVQGIETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISN------ 210
            :.||.|.::.....:.::|..      ||.::     .....:.:|||||||||..||:      
Zfish   212 VKTLLDKLDSASPEKPVVDAP------QPNLM-----SNFLFIFTSGTTGLPKAARISHIKAVMC 265

  Fly   211 -------SILIQDSMLIT------SQSVIYVGSCLDWITGLWAFVFSTVFGCTRIISNKAFTPEY 262
                   .....|.:.:|      |.|::.:|.|::             .|.|.::..|....::
Zfish   266 MAFLRLCGACADDKIYLTLPLYHMSASLLGIGGCIE-------------LGATCVLKRKFSASQF 317

  Fly   263 -------------FVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITH---LNYGGG---S 308
                         ::|.:.:|.:|                  :|..|..:.|   |..|.|   .
Zfish   318 WKDCLKYDITVFQYIGELCRYLVN------------------QPKTLEEVAHNVRLAAGSGLRAD 364

  Fly   309 ISLATLQRSQELCKTAMFNSGYGMTEVGAITINIGISNVSSAGRPVPGIKIRIVDEDGKSLGYNQ 373
            :....::|..::    .....||:||.     :||..|.:....|:           |::..:|:
Zfish   365 VWKEFIRRFGKI----QIREAYGLTEA-----SIGFVNYTDEIGPI-----------GRASYFNK 409

  Fly   374 VGE----------------------IYVHTGQA------------WNGYYGNPV--ETRRMQDF- 401
            :..                      |.|..|:|            :.||.|:..  |.:.::|. 
Zfish   410 LNLPFEFLKCDPQTFEPLRTDTGHCIKVSKGEAGLLVAPVVFTNPFLGYAGDKAMSEKKLLRDVF 474

  Fly   402 ---EGWFHTGDLGYFDEQNFLYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGI---- 459
               :.:|:||||...|.::|:|..||..:..::.|.:...||:..|:..|..:.||.|.|:    
Zfish   475 KTGDVYFNTGDLMLQDHRDFVYFKDRIGDTFRWKGENVSTTEVSEVLGSLDFLLDVNVYGVTVPG 539

  Fly   460 YDEREGDAAGALVVKSKGATISAKEIVEHVAKRLPATQ----KQLRAGVQFTD 508
            |:.|.|.||   ||...|..:..|.:..|:...||...    .:|:..:..||
Zfish   540 YEGRAGMAA---VVLKDGHELDGKRVYSHLLHTLPPYAWPWFLRLQTSLDMTD 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 116/573 (20%)
AFD_class_I 46..519 CDD:302604 116/573 (20%)
LOC568883XP_003199367.1 PRK08279 80..640 CDD:236217 116/573 (20%)
AFD_class_I 97..630 CDD:302604 114/569 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386992at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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