DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and slc27a1b

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001070716.1 Gene:slc27a1b / 553512 ZFINID:ZDB-GENE-061013-672 Length:648 Species:Danio rerio


Alignment Length:532 Identity:108/532 - (20%)
Similarity:197/532 - (37%) Gaps:121/532 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PKNVCQICDVDGVTVTFEQGLTWSIRIAQYLKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTP 106
            |:....:.:..|...:|.:....|..:||::..:|....||:.|..::...::.|.:.....|  
Zfish    92 PEKAALVDESSGEVWSFSELDRRSNAVAQWVLAQGWRSGDVVAIFMESRPQMVALWLGMAKVG-- 154

  Fly   107 FHSVNPVLDDATLTHVFSITKPTLIFCDGQEYDKVHKAT-VGWHPEILTLTDHVE---------- 160
               |.|.|.:      |::.:.:||.|.|     |..|. :.:..|:|.:...|.          
Zfish   155 ---VEPALIN------FNLRRDSLIHCMG-----VSGACGMVFGAELLDVVLEVRESLRSLSLFS 205

  Fly   161 -GVQGIETL-------LDPTTTEKIYQPEVL--KEGGDQTVAILCSSGTTGLPKAVCISNSI--- 212
             |....|.|       ||...::....|..:  .:|.:..:..:.:|||||||||..:.:|.   
Zfish   206 CGSAPAEMLDSLSAADLDALLSKSPETPPAVAHNKGFNDRLFYIYTSGTTGLPKAAIVVHSRYYR 270

  Fly   213 ----------LIQDSMLI-------TSQSVIYVGSCLDWITGLWAFV---FS--------TVFGC 249
                      |..|.::.       ::.::|.||.||  :.||...:   ||        ..:.|
Zfish   271 IAAFSYYSFGLQPDDVVYCCLPLYHSAGNIIGVGQCL--LHGLTVVIRRKFSASRFWDDCVKYNC 333

  Fly   250 TRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGGGSISLATL 314
            |.:         .::|.:.:|.::..|.|...|..:..   |..:.|.|    |.....:...::
Zfish   334 TVV---------QYIGEICRYLLSQPVRPSESLHRVRV---AMGNGLRP----NVWESFMKRFSV 382

  Fly   315 QRSQELCKTAMFNSGYGMTEVGAITIN----IGISNVSSAGRP-VPGIKIRIVDEDGKSLGYN-- 372
            :|..|.         ||.||......|    :|....:|...| |..|::...|||...|..:  
Zfish   383 KRIGEF---------YGATECNCSLANMDNKVGACGFNSVVLPSVYPIRLLRADEDTMELIRDSR 438

  Fly   373 ------QVGEIYVHTG--------QAWNGYYGNPVETRRM-----QDFEGWFHTGDLGYFDEQNF 418
                  :.||..:..|        :.::||......::::     :..:..:.:|||...||..:
Zfish   439 GLCVPCKPGEPGIIVGRINPQDPLRRFDGYANEEATSKKISHNVFRKGDSAYVSGDLMVMDELGY 503

  Fly   419 LYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAK 483
            :|..||..:..::.|.:...||:|.|::.|.:..||.|.|:........||...:.........:
Zfish   504 VYFRDRGGDTFRWRGENVSTTEVEGVLSALLKQTDVAVYGVSVPGVEGKAGMAAIADPENVFDCE 568

  Fly   484 EIVEHVAKRLPA 495
            ..:..|...||:
Zfish   569 TFLRDVQNALPS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 108/532 (20%)
AFD_class_I 46..519 CDD:302604 107/528 (20%)
slc27a1bNP_001070716.1 PRK08279 60..648 CDD:236217 108/532 (20%)
AFD_class_I 103..613 CDD:302604 107/521 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583001
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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