DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and slc27a4

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001017737.1 Gene:slc27a4 / 550432 ZFINID:ZDB-GENE-050417-248 Length:643 Species:Danio rerio


Alignment Length:551 Identity:120/551 - (21%)
Similarity:209/551 - (37%) Gaps:136/551 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQYLKKRGLNHKDVIGIAAKN-STY 92
            :|.|:...::|.:......|.:......:|::...:|.|:|.:|.::|....||:.:..:| ..|
Zfish    75 TVPKLFAKSVKKYGNKTALIFEGTDEKWSFKELDEYSNRVANFLLQQGFREGDVVALFMENRHQY 139

  Fly    93 V-MPLGVA----------------CLMNGTPFHSVNPVLDDATLTHVF-----SITKPTLIFCDG 135
            | :.||:|                .|::.....|...|:..:.||...     |:.|...:|..|
Zfish   140 VGLWLGMAKIGVEAALINFNLRLEALVHCVNISSAKAVVFGSELTEAMCEVHSSMGKTVKLFVSG 204

  Fly   136 QEYDKVHKATVGWHPEILTLTDHVEGVQGIETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSGTT 200
            :           |.|:.:.:     |.:.::.||:.|:|.:..||:  :...|:...|. :||||
Zfish   205 E-----------WDPKRVPV-----GTEHLDPLLETTSTIQPKQPD--RSFTDRLFYIY-TSGTT 250

  Fly   201 GLPKAVCISNS------ILIQDSMLITSQSVIYVGSCLDW------ITGLWAFVFSTVFGCTRII 253
            |:|||..:.:|      .|:.....:..:.|:|  .||..      |.|:..   ..:.|.|.:|
Zfish   251 GMPKAAIVVHSRYYRMAALVYYGFRMKPEDVLY--DCLPLYHSAGNIVGIGQ---GLIHGMTVVI 310

  Fly   254 SNKAFTPEY-------------FVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYG 305
            ..|....::             ::|.:.:|.:|    .||           |.........:..|
Zfish   311 RKKFSASKFWDDCIKYNCTIVQYIGEICRYLLN----QPR-----------KDTERKHKVRMALG 360

  Fly   306 GGSISLATLQRS--QELCKTAMFN-----SGYGMTE----VGAITINIGISNVSSAGRP-VPGIK 358
            .|      |::|  :|.  |..||     ..||.||    :|......|....:|...| |..|:
Zfish   361 NG------LRQSIWEEF--TNRFNVPQIAEFYGATECNCSLGNFDNKTGACGFNSRILPYVYPIR 417

  Fly   359 IRIVDEDGKSL-----------GYNQVGEIYVHTGQ-----AWNGYYGNPVETRRM-QDFEGWFH 406
            :..|||:...|           |..:.|::.....|     .::||.......::: ||.   |.
Zfish   418 LVKVDEETMELIRGPDGVCIPCGPGEPGQLVGRIIQNDPLRRFDGYVNQTATNKKIAQDV---FK 479

  Fly   407 TGDLGY-------FDEQNFLYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGI-YDER 463
            .||..|       .|:..::|..||..:..::.|.:...||:|..::.|..::||.|.|: ....
Zfish   480 KGDSAYLSGDVLVMDDFGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVEVPGA 544

  Fly   464 EGDAAGALVVKSKGATISAKEIVEHVAKRLP 494
            ||.|..|.:...:..|..|| ....:.|.||
Zfish   545 EGKAGMAAIADPENNTDLAK-FSRDLEKALP 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 120/551 (22%)
AFD_class_I 46..519 CDD:302604 117/534 (22%)
slc27a4NP_001017737.1 PRK08279 73..643 CDD:236217 120/551 (22%)
hsFATP4_like 99..608 CDD:213305 116/527 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583201
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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