DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and slc27a6

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001011348.2 Gene:slc27a6 / 496813 XenbaseID:XB-GENE-491992 Length:621 Species:Xenopus tropicalis


Alignment Length:564 Identity:118/564 - (20%)
Similarity:213/564 - (37%) Gaps:113/564 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RNSIYNYDTSVGKIIFNNMK------NWPKNVCQICDVDGVTVTFEQGLTW------SIRIAQ-Y 71
            |..||....||..::.|.|:      |.|..:.|           ||..|:      |.::|| :
 Frog    43 RIEIYKRTGSVVTVVDNFMEQARRVPNKPFLIYQ-----------EQVYTYRDVDRRSNQVAQVF 96

  Fly    72 LKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVLDDATLTHVFSITKPTLIFCDGQ 136
            :|...|..:|.:.:...|....:.:.......|.....:|..:...:|.|.|..:...::.....
 Frog    97 MKYSPLEKEDTVAMLMSNEPDFLNVWFGLAKLGCRLAFLNYNIRSRSLLHCFHSSGAKMLIVGAD 161

  Fly   137 EYDKVHKATVGWHPEIL--TLTDHVE--------GVQGIETLLDPT--TTEKIYQPEVLKEGGDQ 189
            ..:.:.        |||  ...|::.        .::|:.|:||..  .|:|.....:......:
 Frog   162 MVETLE--------EILPNLQEDNISVWVMAKEVSIKGVNTILDKLEHVTDKPVPQHLCHVSSIR 218

  Fly   190 TVAI-LCSSGTTGLPKAVCISNSILIQDSMLI-----TSQSVIYV-------GSCLDWITGLWAF 241
            ...: :.:|||||||||..||....::.:..|     |...::|:       .:.|..|.|    
 Frog   219 AATLYIFTSGTTGLPKAALISQLQTLKGAAGIWAFGGTEDDIVYITLPLYHSAASLIGIGG---- 279

  Fly   242 VFSTVFGCTRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITH---LN 303
              |...|.|.::..|....::::. .||:.:...    :::..|......:|.......|   :.
 Frog   280 --SIYLGATCVLKKKFSASQFWID-CKKHNVTVV----QYIGELCRYLCNQPLKEGEKDHKVRMA 337

  Fly   304 YGGG---SISLATLQR--SQELCKTAMFNSGYGMTEVGAITINIGISNVSSAGR---------PV 354
            .|.|   .:....::|  ..::|:.      ||.|| |.|........:.|.||         |.
 Frog   338 VGNGVRSDVWKEFIRRFGDIKMCEL------YGATE-GNICFMNHTGKIGSVGRSNIFYKLLFPF 395

  Fly   355 PGIKI------RIVDEDG--KSLGYNQVGEI--YVHTGQAWNGYYGNPVETRR------MQDFEG 403
            ..||.      .|::|.|  :.:...:.|.:  .|:....:.||.||...|.:      .:..:.
 Frog   396 ELIKYDIQKDEPIINEQGWCERVKKGETGLLISQVNKNNPFFGYAGNKNHTTKKLLCNVFRKGDV 460

  Fly   404 WFHTGDLGYFDEQNFLYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGI-YDEREGDA 467
            :|:||||...|.:||||..||..:..::.|.:...||:..:|..|:.:|:..:.|: ..|.||..
 Frog   461 YFNTGDLMVQDSENFLYFRDRIGDTFRWKGENVATTEVADIIGMLNFIQEANIYGVAIPEHEGKV 525

  Fly   468 AGALVVKSKGATISAKEIVEHVAKRLPATQK----QLRAGVQFT 507
            ..|.::.....|:..|.|.|.:...||...:    :|:..::.|
 Frog   526 GMASIIVKANETLDVKTIYEQIVTYLPGYARPRFLRLQENMEMT 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 118/564 (21%)
AFD_class_I 46..519 CDD:302604 109/532 (20%)
slc27a6NP_001011348.2 PRK08279 25..621 CDD:236217 118/564 (21%)
AFD_class_I 77..611 CDD:302604 108/519 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386992at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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