DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and acsl1b

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001003569.1 Gene:acsl1b / 445175 ZFINID:ZDB-GENE-040801-88 Length:697 Species:Danio rerio


Alignment Length:574 Identity:129/574 - (22%)
Similarity:212/574 - (36%) Gaps:170/574 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IGIAAKNSTYVMPLGVACL---MNGTPFHSVNPVLDDATLTHVFSITKPTLIFCDGQEYDKVHKA 144
            |||.::|........:||.   :...|.:.   .|....::::...|..:.:.||..|     ||
Zfish   150 IGIFSQNRPEWTIAELACYTYSLISVPLYD---TLGTEAISYILDKTCISTVVCDVPE-----KA 206

  Fly   145 TV------GWHPEILTLTDHVE------------GVQGIETLLDPTTTEKIY--QPEVLKEGGDQ 189
            .:      |....:.||....:            |:| |.:|.|.....|.:  |||..:   ..
Zfish   207 GLLLECVSGRQHSVKTLILMADVDADLQSRAQQCGIQ-IISLTDAENMGKTHRRQPEPPQ---PD 267

  Fly   190 TVAILC-SSGTTGLPKA---------------VCISNSI---------------------LIQDS 217
            .:|::| :|||||.||.               :.::||.                     ::|..
Zfish   268 DLAVICFTSGTTGNPKGAMLTHRNIVSNISAFIHVTNSTCPLSSRDSHISYLPLAHMFERVVQGV 332

  Fly   218 MLITSQSVIY----VGSCLDWITGLWAFVFSTVFGCTRIIS-------NKAFTP----------- 260
            :|:....:.|    :...:|.:..|...:|..|   .|:::       .:|.||           
Zfish   333 VLLHGARIGYFQGDIRVLMDDLIALKPTIFPVV---PRLLNRMFDKIYGQANTPLKRRLLEFAFR 394

  Fly   261 ----EYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGGGSISLATLQRSQELC 321
                |...|::::..|...::..:..:::..|........|||        |..:.|..|:...|
Zfish   395 RKEAEMKSGIMRRDSIWDKIIFKKVQASVGGCVRMMVTGAAPI--------SEPVLTFLRAALGC 451

  Fly   322 KTAMFNSGYGMTE--VGAITINIGISNVSSAGRPVPGIKIRIVDEDGKSLGY---NQVGEIYVHT 381
            :   |..|||.||  .|:.|...|.......|.|:|...|::||.  ..:.|   |..||:.|..
Zfish   452 Q---FYEGYGQTECTAGSTTTLPGDWTAGHVGAPLPCNDIKLVDV--AEMNYYAANGEGEVCVRG 511

  Fly   382 GQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKY-NGLHYWPTEIETV- 444
            ..|:.||..:|.:|:...|.|||.||||:|.:.....|.||||||.|.|. .|.:..|.:||.: 
Zfish   512 PNAFKGYLKDPEKTKEALDEEGWVHTGDIGRWLPNGSLKIVDRKKHIFKLAQGEYIAPEKIENIY 576

  Fly   445 IAELSQVQ--------DVCVV--------------------GIYDE--REGDAAGAL---VVK-S 475
            |...:.||        ..|:|                    |.|::  :..|...|:   ::| .
Zfish   577 IRSEAVVQAFVHGDSLQACLVAIIVPDPDFLPGWAKKRGIEGTYEDLCKNKDIKKAILEDIIKLG 641

  Fly   476 KGATISAKEIVEHVAKR----------LPATQKQLRAGVQ-----FTDKLPANV 514
            |.:.:.:.|.|:.:|..          |..|.|..||.::     ..|:|.||:
Zfish   642 KESGLKSFEQVKDIALHSEMFTIQNGLLTPTLKAKRADLRNHFRSHIDELYANI 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 129/574 (22%)
AFD_class_I 46..519 CDD:302604 129/574 (22%)
acsl1bNP_001003569.1 PLN02736 88..695 CDD:178337 128/572 (22%)
LC-FACS_euk 116..692 CDD:213293 126/569 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.