DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8834 and hll

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:513 Identity:122/513 - (23%)
Similarity:195/513 - (38%) Gaps:131/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DG-VTVTFEQGLTWSIRIAQ---YLKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNP 112
            || .|:||.:   :..|:.|   .|...|:..:..:||.|.|...........|..|.....|.|
  Fly    65 DGWTTLTFGE---YQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYP 126

  Fly   113 VLDDATLTHVFSITKPTL-IFCDGQEYDKVH---------KATVGWHPEILTLTDHVEGVQGIET 167
            ......:.||.:..:.:: :..|.|:..|:.         ||.:..|.......||..|....:.
  Fly   127 SNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQK 191

  Fly   168 LLDPTTTEKIYQPEVLKEG---GDQTVAILCSSGTTGLPKAVCISNSILI----------QDSML 219
            |.:.|.:.::.:..:.:|.   .::...::.:|||.|:||||.:|:..|:          ||..:
  Fly   192 LQEQTFSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQV 256

  Fly   220 ITSQSVIYV------------------GSCL-----DWITGLWAFVF-----STVFGCTRIISN- 255
            .....|.|:                  ..|:     |.:.|.....|     :.:||..|:... 
  Fly   257 GKESFVSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKL 321

  Fly   256 ----------------------KAFTPEYFVGLV----------KKYKINYAVLPP-RHLSALIT 287
                                  :|...|:...|:          .||.:...|:.| |.:..:..
  Fly   322 QERLVAAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLACRVVKPIREMIGVDN 386

  Fly   288 CPDAKPDALAPITHLNYGGGSISLATLQRSQELCKTAMFNSG--------YGMTEV-GAITINIG 343
            |            .:.:.||:      ..|:||   ..|..|        |||:|. ||||:|:.
  Fly   387 C------------RVFFTGGA------PTSEEL---KQFFLGLDIALGECYGMSETSGAITLNVD 430

  Fly   344 ISNVSSAGRPVPGIKIRIVDEDGKSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTG 408
            |||:.|||:...|:.::|.:.|     .|..|||.:.....:.||.|.|.:|......:||.|:|
  Fly   431 ISNLYSAGQACEGVTLKIHEPD-----CNGQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSG 490

  Fly   409 DLGYFDEQNFLYIVDRKKE-ILKYNGLHYWPTEIETVI-AELSQVQDVCVVGIYDERE 464
            ||||.|.:..|.|..|.|| |:...|.:..|..||.:| .||..|.:|.::|  |.|:
  Fly   491 DLGYIDPKGNLIISGRLKELIITAGGENIPPVHIEELIKKELPCVSNVLLIG--DHRK 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 122/513 (24%)
AFD_class_I 46..519 CDD:302604 122/513 (24%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 122/513 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452225
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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