DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and pdgy

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster


Alignment Length:552 Identity:144/552 - (26%)
Similarity:241/552 - (43%) Gaps:43/552 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YNEKDNIWSGAKRNSIYNYDTSVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQYL 72
            |:.:|..:..:..:.:...:..:.:.::.:.|.|.:....:|.:.....||.|....|...|..|
  Fly    55 YSPEDGYYKTSPFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDRQYTFAQMRDASAAFAVRL 119

  Fly    73 K-KRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVL--DDATLTHVFSITKPTLIFCD 134
            : |..|...||:.|...|........:..:..|....:||||.  |:......||..|..:....
  Fly   120 QTKFNLQKPDVLAICLPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVS 184

  Fly   135 GQEYDKVHKAT--VGWHPEILTLTDHVEGV--QGIETLLDPTTTEKIYQPEVLK----EGGDQTV 191
            |  :..:.:|:  ||....|..:....|..  :|.....:.|:|:.: :.|.||    ...|..|
  Fly   185 G--FATLSQASKLVGRQIPIAVVRTSAEEALPEGAIDFSELTSTQNV-RYEDLKAPKEASADDMV 246

  Fly   192 AILCSSGTTGLPKAVCISNSIL------IQDSM---LITSQSVIYVGSCLDWITGLWAFVFSTV- 246
            .:..|||||||||.|.:|::.:      :|.|:   |:..|:.:........|.||...:.|.: 
  Fly   247 FLPFSSGTTGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVLPFFHIYGLTVVMLSKLG 311

  Fly   247 FGCTRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPDAKPDALAPITHLNYGGGSISL 311
            .|| |:.:...|.|:.|:..:.||:.:...|.|.....:|..|....:....:..:..|...|..
  Fly   312 QGC-RLATMPCFKPDDFMRSLDKYQGSILNLVPPIALFMINHPKLTQETAPHLKVVMSGAAPIGQ 375

  Fly   312 ATLQRSQELCKTAMFNSGYGMTEVGAITI----------NIGISNVSSAGRPVPGIKIRIVDEDG 366
            ..::|........:|..||||||...:.:          :.|:...|:..:.||     :...|.
  Fly   376 HDVERFLNKFPNTVFKQGYGMTEASPVVLLTPEGNKVYASTGVLPASTEAKIVP-----LDGSDA 435

  Fly   367 KSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEG-WFHTGDLGYFDEQNFLYIVDRKKEILK 430
            |.:|....||:.|...|...||..|. |..::..:.| |..:||:.::||....||.||.||::|
  Fly   436 KGVGPRTTGELCVRGPQVMAGYLNND-EANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIK 499

  Fly   431 YNGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAKEIVEHVAKRLPA 495
            ..|....|.|:|.|:.:..::.:..|.||..|..|:|..|:||..:|...||:||..:||:|: |
  Fly   500 VKGFQVPPAELEAVLRDHPKILEAAVFGIPHEFNGEAPRAIVVLRQGEKASAEEISAYVAERV-A 563

  Fly   496 TQKQLRAGVQFTDKLPANVNGKTMRKTARDVF 527
            ..|:|..||.|.|::|.|..||.:|:..::.|
  Fly   564 HYKKLEGGVIFVDEVPKNPTGKILRRELKEKF 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 142/540 (26%)
AFD_class_I 46..519 CDD:302604 138/504 (27%)
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 141/528 (27%)
Firefly_Luc_like 99..587 CDD:213279 137/498 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452146
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.