DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and Acsl1

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:549 Identity:125/549 - (22%)
Similarity:206/549 - (37%) Gaps:142/549 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YNEKDNIWSGAKRN-SIYNYDTSVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQY 71
            |::...::.|.:|. .:.|....:|....|....|              ::::|....:..|...
  Rat    87 YDDVRTMYDGFQRGIQVSNDGPCLGSRKPNQPYEW--------------ISYKQVAEMAECIGSA 137

  Fly    72 LKKRGLN--HKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVLD----DATLTHVFSITKPTL 130
            |.::|..  .:..|||.::|....:.:...|.   |....|.|:.|    || :|::.:..:.::
  Rat   138 LIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCF---TYSMVVVPLYDTLGTDA-ITYIVNKAELSV 198

  Fly   131 IFCDGQEYDKV------HKATVGWHP--EILTLTDHVE----------GVQ--GIETLLD----P 171
            ||.|..|..|:      :|.|    |  :|:.:.|..:          ||:  |::.|.|    .
  Rat   199 IFADKPEKAKLLLEGVENKLT----PCLKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLGRVN 259

  Fly   172 TTTEKIYQPEVLKEGGDQTVAILC-SSGTTGLPKAVCISNSILIQD-SMLITSQSVIYVGSCLDW 234
            .|..|..:||.|        ||:| :|||||.||...:::..::.| |..|.:....::.|..|.
  Rat   260 RTKPKPPEPEDL--------AIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFIASPEDV 316

  Fly   235 ITGL--WAFVFSTVFGCT---------------RIISN--KAFTPEYFVGL-------------- 266
            :...  .|.:|.||..|.               |::.:  |...|..|..:              
  Rat   317 LISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRLLNRMFDRIFGQ 381

  Fly   267 ----VKKYKINYAVLPPRHLSALITCPDAKPDAL------------------------APITHLN 303
                ||::.:::|   .:...|.:.....:.::|                        ||:    
  Rat   382 ANTSVKRWLLDFA---SKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPV---- 439

  Fly   304 YGGGSISLATLQRSQELCKTAMFNSGYGMTE--VGAITINIGISNVSSAGRPVPGIKIRIVD-ED 365
                |.::.|..|:...|:   |..|||.||  .|......|.......|.|:|...|::|| ||
  Rat   440 ----SATVLTFLRAALGCQ---FYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVED 497

  Fly   366 GKSLGYNQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILK 430
            .........||:.|.....:.||..:|..|....|.:||.||||:|.:.....|.|:||||.|.|
  Rat   498 MNYQAAKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFK 562

  Fly   431 Y-NGLHYWPTEIETVIAELSQVQDVCVVG 458
            . .|.:..|.:||.:......|..|.|.|
  Rat   563 LAQGEYIAPEKIENIYLRSEAVAQVFVHG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 123/537 (23%)
AFD_class_I 46..519 CDD:302604 118/510 (23%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 119/519 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342974
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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