DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and Slc27a6

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001074541.1 Gene:Slc27a6 / 225579 MGIID:3036230 Length:619 Species:Mus musculus


Alignment Length:566 Identity:120/566 - (21%)
Similarity:201/566 - (35%) Gaps:137/566 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DGVTVTFEQGLTWSIRIAQYLKKRGLNHK-----DVIGIAAKNSTYVMPLGVACLMNGTPFHSVN 111
            :|...|:|.....|.|||..|    |||.     ||:.:...|....:.:.......|.....:|
Mouse    76 EGDVYTYEDVDKRSNRIAHAL----LNHSSLKRGDVVALLMSNEPDFVHVWFGLAKLGCVVAFLN 136

  Fly   112 PVLDDATLTHVFSITKPTLIFCDGQEYDKVHK--ATVGWHPEILTLTDHV-EGVQGIETLLDPTT 173
            ..|...:|.|..:..:||.:...|.....:.:  .::..|..:..:.|.| ||:..::..|...:
Mouse   137 SNLRFDSLLHCINTCEPTAVVVGGDLLGSIEEILPSLPKHVRVWGMKDSVPEGIDSLQEKLSLAS 201

  Fly   174 TEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISNSILIQDSMLITSQSVIYVGSCLDWITGL 238
            .|.:.....:......|...:.:|||||||||..||...:::.|:                  ||
Mouse   202 DEPVPPSHHVTSSLKSTCLYIFTSGTTGLPKAAVISQLQVLKGSV------------------GL 248

  Fly   239 WAF-------VFST------------VFGCTRI----ISNKAFTPEYFVGLVKKYKINYAVLPPR 280
            |||       ::.|            :.||..:    :..|.|:...|....|||.:...    :
Mouse   249 WAFGCTADDIIYITLPLYHSSGSLLGIGGCVELGATCVLKKKFSASQFWNDCKKYNVTVF----Q 309

  Fly   281 HLSALITCPDAKPDALAPITH---LNYGGGSISLATLQ-----RSQELCKTAMFNSGYGMTEVGA 337
            ::..|......:|.......|   |..|.|..|....|     .:.::|:.      ||.||...
Mouse   310 YIGELCRYLCKQPQREGEKDHRVRLAVGNGLSSDVWRQFLDRFGNIKMCEL------YGATEGNI 368

  Fly   338 ITINIGISNVSSAGRPVPGIKIRIVDEDGKSLGYN------------QVGEIYVHTGQAW----- 385
            :.:| ....:.|.||              .:..|:            |..|.: ..||.|     
Mouse   369 VFMN-HTGKIGSVGR--------------ANFFYSLFFSFELIKYDFQKDEPW-RNGQGWCSCVR 417

  Fly   386 -----------------NGYYGNPVETRRMQDF------EGWFHTGDLGYFDEQNFLYIVDRKKE 427
                             .||.|:...|:....|      :.:|:||||.:.|::||:|..||..:
Mouse   418 KGEPGLLISRVNKKNPFFGYAGSDTHTKSKLLFDVFRKGDVYFNTGDLMFQDQENFVYFWDRLGD 482

  Fly   428 ILKYNGLHYWPTEIETVIAELSQVQDVCVVGI----YDEREGDAAGALVVKSKGATISAKEIVEH 488
            ..::.|.:...||:..|:..|..:|:..|.|:    |   ||.|....|:.....::..:::...
Mouse   483 TFRWKGENVATTEVADVLGRLDFIQEANVYGVRVPGY---EGKAGMTSVILKPNKSLDLEKMYNQ 544

  Fly   489 VAKRLPATQKQLRAGVQFTDKLPANVNGKTMR-KTARDVFVALRVS 533
            |...|||....|...:|  ||:......|..: :...:.|..|::|
Mouse   545 VVTSLPAYACPLFLRIQ--DKMETTGTFKLKKLQLVEEGFDPLKIS 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 118/560 (21%)
AFD_class_I 46..519 CDD:302604 117/549 (21%)
Slc27a6NP_001074541.1 AFD_class_I 75..609 CDD:418409 120/566 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839215
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S1729
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386992at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.890

Return to query results.
Submit another query.