DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and acs-15

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_493856.3 Gene:acs-15 / 187666 WormBaseID:WBGene00019920 Length:703 Species:Caenorhabditis elegans


Alignment Length:646 Identity:140/646 - (21%)
Similarity:227/646 - (35%) Gaps:210/646 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IPTTYNEKDNIWSGAKRNSIYNYDTSVGKIIFNNMK---NWPKNVCQICDVDGVTVTFEQGLTWS 65
            |.|||       :|.:|.........:||.:..|.|   .|              :|:||....|
 Worm    77 ILTTY-------AGIRRGPTVGGKEMLGKRVMKNGKLEWEW--------------ITYEQAFEIS 120

  Fly    66 IRIAQYLKKRG--LNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVN-PVLD---DATLTHVFS 124
            ..::|.::|.|  :..|..|||.:||    .|..|...|....|.:|: |:.|   :..:.::.:
 Worm   121 DNVSQAIRKLGIEIGDKSNIGIYSKN----RPEWVLSDMAIHNFSNVSVPIYDNIPNEDMHYITN 181

  Fly   125 ITKPTLIFCDGQ---------------------EYDKVH---KATVGWHP-EILTLTDHVE-GVQ 163
            :.:..|:|.|.:                     ::|||.   ||....:. ::.:..:.|| |.:
 Worm   182 LCEIPLMFVDSEDKTTQLIKDKTYLSKSLKYIVQFDKVSDEMKAMAESNNFQLWSFDEFVELGKK 246

  Fly   164 GIETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISN------------------ 210
            .......|.|      ||.|       ..|..:|||||.||...:::                  
 Worm   247 HEHRPHAPPT------PETL-------ATISFTSGTTGRPKGAMLTHLNLCSTTVACEEFEHVEG 298

  Fly   211 -------------------------------------SILIQDSMLITSQSVIYVGSCLDWITG- 237
                                                 ::|::|...:..::.    :|:..:.| 
 Worm   299 ELDSYLSYLPLAHVYERHCTLAHFKIGSRIGFSRGDPALLVEDIQALAPRTF----ACVPRVLGK 359

  Fly   238 LWAFVFSTVFG--CTRIISNKAFTPEYF----VG------LVKKYKIN--YAVLPPRHLSALITC 288
            ::..|.|.|..  ..::|.|.|...:.:    .|      ||.||.::  ..:|.|.....||  
 Worm   360 IYKSVMSQVQDKPVKKMILNSAIAYKLYHYKMTGKATRDTLVDKYILHKIQMILGPNIKQFLI-- 422

  Fly   289 PDAKPDALAPITHLNYGGGSISLATLQRSQELCKTAMFNSGYGMTEV-GAITINIGISNVSSAGR 352
            |.||.|.    :.:.:..|:..:..|:.             ||:||. |..||.:....:.|.|.
 Worm   423 PAAKTDN----SSMRFARGAFGIEILEL-------------YGLTETSGPTTIQLVGDMLGSVGP 470

  Fly   353 PVPGIKIRIVDEDGKSLGY---NQVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFD 414
            |:....|::||.  ..|||   ...||:.|......:|||.:|..|......:|:..|||:|.|.
 Worm   471 PISCTSIKLVDI--AELGYFVDENGGEVLVKGHNVTSGYYKDPKATASAFTEDGFMKTGDIGKFT 533

  Fly   415 EQNFLYIVDRKKEILKY-NGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGA 478
            .:..|.::||:..:||. .|....|...|::......||.:||.|   .:|.....|:||...  
 Worm   534 PEGTLQLIDRRDNVLKLPQGEFVAPDLTESLYISSKFVQQICVHG---NKEKPWLVAVVVPDP-- 593

  Fly   479 TISAKEIVEHVAKRLPATQKQLRAGVQFTDKLPANVNGKTMRK------TARDV---FVAL 530
                    |::|...               .|..|:.|||..:      .|.||   ||.|
 Worm   594 --------EYLASHA---------------NLEHNIEGKTYEELCKIPALAEDVLRDFVDL 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 133/627 (21%)
AFD_class_I 46..519 CDD:302604 122/579 (21%)
acs-15NP_493856.3 PLN02736 96..686 CDD:178337 134/620 (22%)
AFD_class_I 107..683 CDD:302604 130/609 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160554
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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