DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8834 and mec-18

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_508731.3 Gene:mec-18 / 180701 WormBaseID:WBGene00003179 Length:638 Species:Caenorhabditis elegans


Alignment Length:614 Identity:145/614 - (23%)
Similarity:248/614 - (40%) Gaps:122/614 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WSGAKRNSIYNYDTSVGKIIFNNMKNWPKNVCQICDVD-GVTVTFEQGLTWSIRIAQYLKKRGLN 78
            |......|.::|       .|:.:.....|:. |.||| |....:.:...|....|..||:..:.
 Worm    11 WDKTAAQSFHDY-------FFSKISAHGSNLA-IVDVDSGKQWRYSEIRNWCEMCATRLKELQVT 67

  Fly    79 HKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVN---------PVLDDATLTHVF----------- 123
            ....:.:....:...:.:.:||.:.|....:||         .::|.:..||:.           
 Worm    68 SGSRVAVITGTTGQAIFVHLACSIIGCSAVAVNGWNAVDEIWTLVDLSEATHLIVENQFMQKADD 132

  Fly   124 ------------------------------------SI---TKPTLIFCDGQEYDKVHKATVGWH 149
                                                ||   .||.|:       .::..|.:...
 Worm   133 VRRKAQMRGGGRIKHVRQIEDVLTAERINVDSARKRSIDVKQKPPLV-------KEMSLAKINLT 190

  Fly   150 P----EILTLTDHVEGVQGIETLLDPTTTEKIYQPE-----VLKEGGDQTVAILCSSGTTGLPKA 205
            |    :|..||..|..|.|....|:......:...|     :.:..|...:.||.:||||||.||
 Worm   191 PVLPEDIADLTSPVSEVSGQSKELNGDVESSVVDSEEVQTPIQQVSGQNPLLILFTSGTTGLAKA 255

  Fly   206 VCISNSILIQDSMLIT--------SQSVIYVGSCLDWITGLWAFVFSTVFGCTRIISNKAFTPEY 262
            ..:|:..||.:...|:        ::....:...:..|.|:.:..::.:.|.:..:.:|.....:
 Worm   256 AELSHRSLIINIQQISLPLYGPVQTKERFLLPLSIAHIYGIVSAYYALINGASLYLISKQSNRLF 320

  Fly   263 FVGLVKKYKINYAVLPPRHLSALITCPDAKPD------------ALAPITHLNYGGGSISLATLQ 315
            ...||.. :||...:.|..:..:.|  ||..|            |.|||       .|.|.|.::
 Worm   321 METLVNN-QINVMHITPAIVHWMAT--DAIVDDYKTPNLRSVLCAGAPI-------DSNSAAAMK 375

  Fly   316 RSQELCKTAMFNSGYGMTEVGAI-TINIGI-SNVSSAGRPVPGIKIRIVDEDGKSLGY-NQVGEI 377
            ....:   ..|...:||||:|.| |::..: ..:.|.|.|:||:..::|:.:.|.|.. .|.|:|
 Worm   376 SRLNI---KDFRQSFGMTELGGICTMSPYLDEKIESVGNPLPGMLFKVVNWETKQLCLPRQPGQI 437

  Fly   378 YVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKYNGLHYWPTEIE 442
            .|...|....||.||..|..:.|..|:..|||.|::||...:|::||.|:|:|..|....|:|:|
 Worm   438 IVLGPQVSPCYYKNPKATSELFDATGFVKTGDAGFYDEVGRIYVLDRIKDIIKCKGTMICPSEVE 502

  Fly   443 TVIAELSQVQDVCVVGIYDEREGDAAGALVVK-SKGATISAKEIVEHVAKRLPATQKQLRAGVQF 506
            .|:...:.:.|..|||..|...|:...|.||| ::...:::.|:.::|:.:: ||.|:||.||.|
 Worm   503 LVLRAHAGIDDCAVVGRQDHVTGEVPAAFVVKNAQHPLLASAEVRQYVSGKI-ATFKELRGGVFF 566

  Fly   507 TDKLPANVNGKTMRKTARDVFVALRVSGK 535
            ..::|.:|.||.:|:..|..:...|.:.|
 Worm   567 ISEIPRSVCGKILRRNLRQFWDRERTNSK 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 142/601 (24%)
AFD_class_I 46..519 CDD:302604 136/565 (24%)
mec-18NP_508731.3 CaiC 12..585 CDD:223395 141/601 (23%)
AFD_class_I 35..579 CDD:302604 136/565 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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