DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8834 and acs-18

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_501893.1 Gene:acs-18 / 177918 WormBaseID:WBGene00011173 Length:700 Species:Caenorhabditis elegans


Alignment Length:649 Identity:134/649 - (20%)
Similarity:227/649 - (34%) Gaps:210/649 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TTYNEKDNIWSGAKRNSIYNYDTSVGKIIFNNMK---NWPKNVCQICDVDGVTVTFEQGLTWSIR 67
            |||       ||.:|.........:||.:..:.|   .|              ::::|....|..
 Worm    83 TTY-------SGIRRGPTVGGKEMLGKRVMKDGKLEWEW--------------ISYDQAFETSDH 126

  Fly    68 IAQYLKKRG--LNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVN-PVLDDAT---LTHVFSIT 126
            .:|.::|.|  :..:..|||.:.|    .|..:...|....|.:|: |:.|..|   :.::.::.
 Worm   127 ASQAIRKLGIEIGEESKIGIYSNN----RPEWILSEMAIHNFSNVSVPLYDTITNDDMHYITNLC 187

  Fly   127 KPTLIFCDGQ------EYDKVHKATVGWHPEILTLTDHVEGV--------------------QGI 165
            :.:|:|.|.:      ..||.:.:::.:..:....:|.::.:                    |..
 Worm   188 EISLMFVDAEIKTKQLIRDKSYLSSLKYIVQFNECSDDIKEMARENDFRLWSFNEFVEMGKKQKH 252

  Fly   166 ETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCIS---------------NSILIQ 215
            ...:.||       ||.|       ..|..:|||||.||.|.::               |...:|
 Worm   253 RPHVPPT-------PETL-------ATISFTSGTTGRPKGVMLTHLNMCSATMSCEEFENEAGVQ 303

  Fly   216 DSML-ITSQSVIYVGSCLDWITGLWAFVFSTVFGCTR------IISNKAFTPEYFVGL------- 266
            |:.| ....:.||...||     |..|:..:..|.:|      :...:|..|..|..:       
 Worm   304 DAYLSYLPLAHIYERLCL-----LSNFMIGSRIGFSRGDPKLLVDDVQALAPRSFATVPRVIDKI 363

  Fly   267 ------------VKKYKINYAVLPP--------------------RHLSALITCPD--------A 291
                        :||..:|.|:...                    .|...::..|:        |
 Worm   364 HKAVMKQVQDKPLKKMILNAAIAYKLYHYKMTGKATRKTWVDKYVLHKIQMLLGPNIRQLILGAA 428

  Fly   292 KPDALAPITHLNYGGGSISLATLQRSQELCKTAMFNSGYGMTEV-GAITIN-IGISNVSSAGRPV 354
            |.|    ::.:.:..|:..:..|:             |||.||. |..|:. :|.:.:...|.|:
 Worm   429 KSD----VSAMRFARGAFGVEVLE-------------GYGQTETSGPTTLQLVGDTRIGCVGPPM 476

  Fly   355 PGIKIRIVDEDGKSLGYN---QVGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQ 416
            ....|:::|.  ..|||:   ..||:.|......:|||.||..|......:|:..|||:|.|..:
 Worm   477 ACAMIKLIDV--PELGYSVDKNGGEVLVKGHNVTSGYYKNPEATASSFTEDGYMKTGDIGRFTAE 539

  Fly   417 NFLYIVDRKKEILKY-NGLHYWPTEIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATI 480
            ..|.|:||:|.:.|. .|....|...|::....|.||.:.|.|   :.|.....|:||... ..:
 Worm   540 GSLQIIDRRKNVFKMPQGKFVAPDLTESLYTSSSFVQQIYVHG---DMEKPWLVAIVVPDP-EYL 600

  Fly   481 SAKEIVEHVAKRLPATQKQLRAGVQFTDKLPANVNGKTMRK------TARDV---FVALRVSGK 535
            ::..:.:|                        |:||||..:      .|.||   ||.|....|
 Worm   601 ASYALTKH------------------------NINGKTYEQLCNIPILADDVLRQFVELTEEDK 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 126/627 (20%)
AFD_class_I 46..519 CDD:302604 116/579 (20%)
acs-18NP_501893.1 LC-FACS_euk 111..688 CDD:341250 125/614 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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